Orcinus orca (killer whale): 101272180 Help Entry 101272180         CDS       T05247                                  Symbol CAPRIN2 Name (RefSeq) caprin-2 isoform X4   KO K18744   caprin-2 Organism oor  Orcinus orca (killer whale) Brite KEGG Orthology (KO) [BR:oor00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oor03019]     101272180 (CAPRIN2) Messenger RNA biogenesis [BR:oor03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Other mRNA localization factors      101272180 (CAPRIN2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Caprin-1_C Caprin-1_dimer C1q Motif Other DBs NCBI-GeneID:  101272180 NCBI-ProteinID:  XP_012388873 LinkDB All DBs Position 11:complement(25543847..25585981) Genome browser AA seq 1069 aa AA seqDB search MVQLSSSPFGYQSPSGHSEEGKEGNMKSAKPQVNHSQHGESQRAMSPLQPALGSAASPSQ AYETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEF AKELQKTFSGLSQDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLMQEHVQKDF KGGLNGAVYLPLKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGT TYKHMKDLLSKLLNSGYFESIPVPKNAKEKEVSLEEEMLIKSEKKKQLSKTESVKESESL MELAQPEIQPQEFLNRRYMTEVDYSSKQDEEQSWEADYARKPNLPKCWDVLTEPDGQEKK QESFKSWESSVKHQEVSKPAVSLEQRKQEIPKLRSTLQEEQKKQDVSKTKATPSQWKQEA LKSKVGYIQEEQKKQETPKPWPVQLQKEQDPKKQTPKSWTPSVQSEQDITKSWTTPTCEE QDSRPPETPKSWENNVESQKHPLTTQSQISPKSWGVATASLIPNDQLLPRKFNTEPKDVP KPMHQPVGSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQESILDFDKPPSAIPSSQPPSA TPGSPVASTEQNLSNQSDFLQEPLQAASSPVTCSSNACLVTTDQASSGSETEFMTSETPE AAVPPSKKPSSLASPNPPMSKGSEQGFQSPPASSSSVTINTAPFQAMQTVFNVNAPLPPR KEQEIKESPYSPGYNQSFTTASTQTPPQCQLPAIHVEQTVLSQETASYPDGTIQVSNGSL AFYPAQTNVFPRPSQPFVNSRGSVRGCTRGGRLLTNSYRSPGGYKGFDTYRGPPSISNGN YSQLQFQAREYPGTPYSQRDNFQQCYKRGGTSGGPRANSRAGWSDSSQVSSPERDNETFN SGDSGQGDSRSMTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIV FDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYAND GAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD NT seq 3210 nt NT seq  +upstreamnt  +downstreamnt atggtgcaactctcttcatctccatttggttaccagtcaccttcaggccattcggaggag ggaaaggaggggaatatgaagtcagccaagccccaagtgaaccacagtcagcatggggaa agccagcgggccatgagccccttgcagcctgctctcggttctgctgcctctccttcccaa gcatatgagacatatattgataatggactcatatgccttaaacacaaaatcagaaacatc gagaaaaagaagctcaaactggaagattacaaggatcgcctgaaaaatggagagcaactt aatccagaccagttggaagcagttgagaaatatgaagaagtgctacataacttagaattt gccaaggagcttcagaaaaccttttctggactgagccaagatctgcttaaagcgcagaag aaagcccagagaagggagcacatgctaaaacttgaggctgagaagaaaaagcttcgcact atacttcaagttcagtatgtattacagaacttgatgcaggaacatgtacagaaagacttc aaagggggcttgaatggtgcagtgtatttgcctttaaaagaacttgactacctcattaaa ttttcaaaattgacctgtcctgaaagaaatgaaagtctgagtgttgaagaccagatggag cagtcatccttgtacttttgggaccttttggaaggtagtgagaaagcagtggtaggaacg acatacaaacacatgaaagatctactatctaaattgttgaactcaggctattttgaaagt atcccagttccaaaaaatgctaaggaaaaagaggtatcattggaggaagaaatgctaata aaatcagagaagaaaaaacaattatcgaagactgaatctgtcaaagagtcagagtctctt atggaacttgcacagccagagatacaaccacaagagtttcttaacagacgctacatgacg gaagtagattattcaagtaaacaagatgaagagcaatcttgggaagcagattatgctaga aaaccaaatctccccaaatgttgggatgtgcttaccgaaccagatggtcaggagaagaaa caggaatccttcaagtcctgggagtcttccgtgaagcaccaggaggtatcaaagcctgca gtttccttagaacagaggaaacaagagattccaaaactcaggtccactctgcaggaagag cagaagaagcaggatgtctcgaaaaccaaggcaactcctagccagtggaagcaagaagct cttaaatccaaagtgggatacattcaagaggaacagaagaagcaggagacaccaaagcct tggccagttcagctgcagaaagaacaggatccaaagaagcaaactccaaagtcttggaca ccttctgtgcagagtgagcaggacatcaccaagtcatggaccactcccacgtgtgaagaa caggattcaagaccgccagagactccaaaatcctgggaaaacaatgttgagagtcaaaaa caccctttaacaacacaatcacagatttctccaaagtcctggggggtagctacagcaagc ctcataccaaatgaccagctgctgcccaggaagtttaatacagaacccaaagatgtgcct aagcctatgcatcagcctgtaggttcttcctctacccttccaaaggatccagtattgagg aaagaaaaactgcaggatctgatgacccagattcaaggaacttgtaactttatgcaagaa tctattctggattttgacaaacctccaagtgcaattccatcatcacagccgccttcagct actccaggtagcccagtagcatctacagaacaaaatctatccaatcaaagtgattttctt caagagccattacaggctgcttcttctccagttacttgtagctcaaatgcttgcttggtt actaccgatcaggcctcttcaggatctgaaacagagtttatgacctcagagactcctgag gcagcagtacccccaagcaagaaaccgtcttcactagcttctccaaatcctcccatgtca aagggctctgaacagggcttccagtcacctccagcaagtagtagttcagtaaccattaac acagcaccctttcaagccatgcagacagtatttaatgttaatgcacctctgcctccacgt aaagaacaagaaataaaagaatccccttattcacctggctacaatcagagttttactaca gcaagtacacagacaccaccccagtgccaactgccagctatacacgtagaacaaactgtc ctttctcaagagactgcaagttatcctgatggaactattcaagtaagcaatggtagcctt gccttttacccagcacagacgaatgtatttcccagaccctctcaaccatttgtcaatagc cggggatctgttagaggatgtactcgtggtgggagattactaaccaattcgtatcggtcc cctggtggttataaaggttttgatacctatagaggacctccttcaatttccaatggaaat tatagccagctacagttccaagctagagagtatcctggaacaccttattcccaaagggat aatttccagcagtgttacaagcgaggaggaacatctggtggtcctcgggcaaattctaga gcagggtggagtgattcttctcaggtgagcagcccagaaagagacaacgaaacctttaac agtggtgactctggacaaggagactcccgtagcatgacccctgtggatgtgccagtgaca aacccagcagccaccatactgccagtacacgtgtatcccctgcctcagcagatgcgagtt gccttctcagcagccagaacctccaatcttgcccctggaactttagaccaacctattgtg tttgatcttcttctgaacaacttgggagaaacttttgatcttcagcttggtagatttaat tgcccagtgaatggcacttatgttttcatttttcacatgctaaagctggcagtgaatgtg ccactgtatgtcaacctcatgaagaatgaagaggtcttggtatctgcctatgccaatgat ggtgctccagaccatgaaactgctagcaatcatgcaattcttcagctgttccagggagac cagatatggttacgtttgcacagaggagcaatttatggaagtagttggaaatattctacg ttttcaggctatcttctttaccaagattga

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