Orcinus orca (killer whale): 101272231
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Entry
101272231 CDS
T05247
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101272231 (PRDM1)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101272231 (PRDM1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
Motif
Other DBs
NCBI-GeneID:
101272231
NCBI-ProteinID:
XP_004264818
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All DBs
Position
12:complement(52155425..52178359)
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AA seq
823 aa
AA seq
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MLDICLEKRVGTTLAAPKCNSSAVKVPGLAEGTEGTMKMDMEDADMTLWTEAEFEEKCTY
IVNDHPWDSGTEGGTSVQAEASLPRNLLFKYATNSKEVIGVVSKEYIPKGTRFGPLIGEI
YTSDTVPKNANRKYFWRIYSRGELHHFIDGFNEEKSNWLRYVNPAHSAREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQSHPKQQSTEKHELCP
KNVPKREYSVKEILKLDSHPSKGKDLYRSNISPLTLEKDADDFRKNGSPEMPFYPRVVYP
IRAPLPEDFLKASLAYGMERPPYIAHSPIPSSTTPSPSTRSSPDRSLHSSPGNTVSPRAP
GSQEHRDPYAYLNAPYAAAAAEGLGSYPGYAPPPHLPPAFIPSYNAHYPKFLLPPYGMNC
NGLGAVGNINGLGSFGLFPRLYPVYGGLLGGGGLPPPMLAPASLPSSLPSEGARRLLQPE
HPREVLVPAPHSAFSLPGAAASLKDKACSPTSGSPTAGTAATAEHVVQPKATSAAAAAPG
GGDEAVNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGER
PFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQC
KVCPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHLCSLKVHLKGYCPVAPATGLPLE
DLTRINEEIEKFDISDNADRLEDMEDNVDVTSVVEKEILAVVRKEKEETGLKVSLQRNMG
NGLLSGCSLYESTDPSLLKLPHSNPLPLGPVKVKQETVEPMDP
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgttggatatttgcttggaaaaacgtgtgggtacgaccttggctgcccctaagtgtaac
tccagtgctgtgaaggttccagggttggcagaggggactgaggggaccatgaaaatggac
atggaggacgcggacatgactctgtggacagaggctgagtttgaggagaagtgtacatac
attgtgaacgaccacccctgggattctggcaccgaaggaggcacttcggttcaggcagag
gcatccttaccgaggaatctgcttttcaaatatgccacaaacagcaaagaggttattgga
gtggtgagtaaagaatacataccaaaggggacacgttttggacctctaataggtgaaatc
tacaccagtgatacagttcccaagaacgccaacaggaaatatttttggcggatctattcc
cgaggggagcttcaccacttcatcgatggctttaatgaggagaagagcaactggctgcgc
tacgtgaacccagcacattctgcccgggagcagaacctggccgcctgtcagaacggcatg
aacatctacttctacaccattaagcccatccccgccaaccaggagcttcttgtgtggtat
tgccgggactttgcggaaaggcttcactacccttatcctggagagctgacaatgatgaat
ctcacgcaaacccagagccatccaaagcagcagagcactgagaaacatgaactttgccca
aagaatgtcccgaagagagagtacagcgtgaaagaaatactaaaattggactcccacccc
tccaaagggaaggacttataccgctccaacatttcacccctcactttggaaaaggacgcg
gatgactttcggaaaaatgggagccccgagatgcccttctacccgcgggtggtgtacccg
atccgggcccctctaccggaagactttctgaaagcttccctggcctacgggatggagcgg
ccgccctacatcgcgcactcccccatcccgtcctccacgacgcccagcccctcgacgcgc
agcagcccagaccggagcctgcacagcagccccgggaacaccgtgtcgccgcgggccccc
ggctcccaggagcaccgggacccttatgcctacttgaacgctccgtacgccgccgccgcc
gctgaggggctgggctcctaccccggctacgcgccgcccccgcacctgccgcccgccttc
atcccttcctacaacgcgcactaccccaagttcctgctgcccccctacggcatgaactgc
aacggcctgggcgccgtgggcaacatcaacggcctcggcagcttcggcctcttcccgagg
ctgtaccccgtgtacggcggcctcctgggcgggggcggcctgcctcccccgatgctggcg
cccgcctcccttcccagctcgctgccctcggagggggcgcgtcgcctgctgcagcccgag
cacccccgggaggtgctggtgcccgcgccgcacagtgccttctccctgcccggggcggcc
gccagcctgaaggacaaggcctgcagccccaccagcgggtccccgacggccggcaccgcc
gccacggccgagcacgtggtgcagcccaaagctacctcagcggccgcggcagcccccggc
ggcggcgacgaggccgtgaatctaatcaagaacaaaaggaacatgactggctacaagacg
ctcccctaccccctgaagaagcagaacggcaagatcaagtacgagtgcaacgtctgcgcc
aagacttttggccaactctcaaacctgaaggtccacctccgagtgcacagcggagaacgg
cctttcaaatgccagacttgcaacaaaggcttcactcagctcgcccacctgcagaaacac
tacctggtacacacgggagagaagccacatgaatgccaggtttgccacaagcgatttagc
agcaccagcaatctcaagacccacctgcgactccactccggagagaaaccttaccagtgc
aaggtgtgccccgccaagttcacccagtttgtgcacctgaaactccacaagcgcctacac
acccgggagcggccccacaagtgtgcccactgccacaagagctacatccatctctgcagc
ctcaaggtccacctgaaggggtattgtcctgtggccccagccacggggctgcctctggag
gacctgaccagaatcaacgaagaaatcgagaagtttgacatcagcgacaatgccgaccgg
ctggaggacatggaggacaacgttgacgtgacctctgtggtggagaaggagattctggcc
gtggtcagaaaagagaaagaagaaactggcctgaaagtgtctttgcaaagaaacatgggg
aatggactgctctcaggatgtagcctctacgagtcaacagacccgtccctcctgaagttg
cctcacagcaacccactacctctgggacctgtaaaggtcaaacaagaaacagtcgaacca
atggatccttaa
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