Orcinus orca (killer whale): 101272305
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Entry
101272305 CDS
T05247
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X2
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101272305 (LRBA)
Membrane trafficking [BR:
oor04131
]
Endosome - Lysosome transport
Others
Others
101272305 (LRBA)
Endosome - Golgi transport
101272305 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101272305 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR55
WD40_MABP1-WDR62_2nd
SUKH_6
Motif
Other DBs
NCBI-GeneID:
101272305
NCBI-ProteinID:
XP_012390956
LinkDB
All DBs
Position
4:complement(31190940..31919838)
Genome browser
AA seq
2856 aa
AA seq
DB search
MASEDSIAPSPPPTGDDGGGGGKGEETPAEGGALSLKPGLPIRGIRMKFAVLTGLVEVGE
VSNRDIVETVFNLLVGGQFDLEMNFIIQEGESIICMVDLLEKCDVTCQAEVWSMFTAILK
KSIRNLQICTEVGLVEKVLGKIEKVDSMIADLLVDMLGVLASYNLTVRELKLFFSKLQGD
KGQWPPHAGKLLSVLKHIPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSVKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAF
TYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL
FAQLDYRQYLSDEVDLTVCSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSH
VSRAVLELCLAFSKYLSNLQNGMPLLKQLCDHILLNPAIWIHTPAKVQLTLYTYLSTEFI
GTVNIYNAIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEMLSLRAFLL
MFIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRN
GLRVIYKLMASTSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLI
TMTTYNVLFEILIEQICTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLY
HAIKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREHQGKVDEEIGQCSSSPIQAVS
GISRDVNVSVGSQQSDTKDSPPSSHITRTSDEKSSIGKTSSVESASIVELQTHNTSNEER
TTVQENQELLDEVPLEETLKNETTNAESLEGSSDIIEAVTVSSDSFKTTGKNIMTVNEVT
ASISSPSEEDASEVPELLDKSVVEEEEDDDYVELKVESIPTEEASLPTELQDNSLSPAAS
EANERMDMFSNDHKLIFQEEQPVSKKQTDTETRDPKDSEVLTMTASGSSATSPGTTASQA
TVQSDVGQMLEVGEKTNLAGETKLHSDSNSSTFESPTTSEQRIAKLDASSVATDTERLEL
KATTNMEASQRHQPVLEMSRQQEQPGQGTAPDAVNGQRRNSRSMFRIPEFRWSQVHQRLL
TDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLL
SAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGGI
LRQCLRLVCAVAVRNCLECQQHSQLRTKGKAGKVQKTTHGLIPMGKSAAKSPVDIVTGGI
SPVRDFDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNE
RHSQSFQETGSESGNLSLPDGENSPAAFSPLTPASMEESESASSARRRDSGIGEEMATGL
GSNVDVAPPVAPPSVSAGPDAISEVLCTLSSEVSKSQETKSDGENELDNKGAPSVPVSKN
INVKDILRSLVNIPGDGVTVDPALLPPACLGALGDLSVEQPVQFRSFDRSVIVATKKSAV
LPSTLTSIPTNAVSVVSSVDSAQASDVGGESPGGRSSNAKLPAVPTVGSVPQDQVSNMSI
TERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVML
LCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDVHRHAE
FESLCAQYSADRREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRP
REFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHAADEDILAKGKQSIKSQALGN
QNSENEILLEGDDDTLSSVDEKDLENPTGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFE
VDEEDPNFKKIDPKILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVAIMFNF
PDPATVKKVVNYLPRVGIGTSFGLLQTRRISLASPRQLFKASNMTQRWQHREISNFEYLM
FLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAER
YESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTSFLNLQGGKFDHADRTFSSISRAW
RNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVRIN
RLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSITDSVLREAV
EAQIRSFGQTPSQLLIEPHPPRGSAMQASPLMFTDQAQQDVIMVLKFPSNSPVTHVAANT
QPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPCQLPVEIDPLIASNTGMHRRQIT
DLLDQSIQVHSQCFVITSDNRYVLLCGFWDKSFRVYSADTGKLIQVVFGHWDVVTCLTRS
ESYIGGNCYILSGSRDATLLLWYWNGRSSGIGDNPGSETTTPRAILTGHDSEITCAAVCA
ELGLVLSGSKEGPCLIHSMNGDLLRTLEGPENCLKPKLMQASREGHCVIFYENGFFCTFS
VNGKLQATVETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVSDLKQLFAYPGCDAGIRAM
ALSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8571 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaagacagtattgccccttccccgccaccaacaggtgatgacgggggaggt
ggagggaaaggagaagaaacccctgccgaagggggtgccttgtctctgaaaccagggctc
cctatcaggggcatcagaatgaaatttgccgtgttgacggggttggttgaagttggagaa
gtatccaatagggatattgtagaaactgtctttaacctgttggtaggagggcaatttgat
ttagaaatgaatttcattattcaagaaggtgagagtatcatctgtatggtggacctatta
gagaaatgtgatgttacttgccaagcagaagtctggagcatgtttacagccattctgaag
aaaagcatacgaaatcttcagatctgcactgaagtaggccttgttgagaaagtgcttggg
aaaattgaaaaagttgacagtatgatagcagatcttttagttgacatgttgggagtgctg
gctagctacaatttgacagttcgagaactaaagctcttcttcagtaaacttcaaggagat
aaaggacaatggcctccacatgctggaaagttgctgtctgtgttaaagcacataccacag
aagtatggtccggatgcctttttcaactttccaggaaagagtgctgcagctattgcatta
cctcctatagccaaatggccataccagaatggttttacatttcatacctggcttagaatg
gatcctgtaaataacatcaatgtggataaagataaaccatatttgtattgtttcagaacc
agcaaaggtcttggttattctgcacactttgttgggggatgtttaattataacatcagta
aagtcaaaaggaaaaggctttcaacactgtgtgaaatttgatttcaagccacaaaagtgg
tatatggtaactatagtgcacatttataaccggtggaagaacagtgagcttcgatgttat
gtgaatggtgagcttgcttcctatggagagataacatggtttgtcaacaccagtgatacc
tttgacaagtgtttcctgggctcatcagaaacagcagatgctaatagggtattctgtggt
cagatgactgcagtttacctttttagtgaagctcttaatgcagctcagatttttgctatt
tatcaattgggcctgggatacaagggtacatttaaatttaaagcagaaagtgacctgttc
cttgctgagcatcacaaacttttattgtatgatggcaaactctctagtgccattgcattc
acatacaatccacgcgccacagatgcccagctttgcctcgaatcatcccctaaggacaac
ccttcaatttttgttcattcaccacatgcactcatgctccaggatgtgaaggcagtttta
acacattccatccaaagtgccatgcattcaattggaggagtacaagtgctgtttccactt
tttgcacagttggattataggcagtatttatctgatgaagttgacttgactgtatgttca
actttgctggcttttatcatggagctgttgaagaactcaattgctatgcaagagcagatg
cttgcctgcaagggctttttggtaataggatatagtcttgaaaagtcttccaaatcccat
gtcagcagagcagtacttgaactttgccttgcattttcaaaatatctgagtaatctgcag
aatgggatgcccctactcaagcaattgtgtgatcacattcttcttaacccagctatatgg
attcataccccagccaaggttcagttgacactctatacttatctgtctacggaattcatt
ggtacagtcaacatatataatgccattcggagagttggaacagtgcttctcatcatgcat
acactgaagtactactattgggcagtgaatcctcaggatcggagtggtatcaccccaaaa
ggattagatggaccacgacctaatcaaaaagaaatgctttctctacgagcgttcttgttg
atgttcattaagcaattagtgatgaaggattctggagtaaaggaagatgagctacaggcc
attcttaattatctactcactatgcatgaggatgacaatctaatggatgtcctacagctg
cttgttgcattaatgtcagaacatcctaattctatgatacctgcttttgaccaaaggaat
gggttacgagttatctataaacttatggcatcaacaagtgaaggaatcagagtacaagct
ctcaaggcaatgggctattttttaaaacacctggccccaaaaagaaaagctgaagtcatg
cttggacatggattgttttcattgctagctgaaagactcatgcttcagacaaatttaatc
acaatgaccacatataatgtcctatttgagattcttatagaacagatttgtactcaggtg
atacataaacagcatccagatcctgattcttcagttaagatacaaaatcctcagatacta
aaagtaattgcaaccctacttcgaaattctccccagtgcccagagagcatggaagttcgc
agagcctttctttctgacatgattaaactttttaataacagcagagaaaatagaaggagc
ttgctacagtgttctgtgtggcaagagtggatgctttctctctgctattttaatcctaag
aattcagatgagcaaaagataacagaaatggtatatgccatattccgaatcctactttac
catgcaatcaaatatgagtggggtggctggcgtgtgtgggtagacactttatcaatcaca
cattcaaaggtcacttttgaaatacataaagaaaaccttgccaatatatttagggaacac
cagggaaaagttgatgaagaaatagggcaatgttcttcaagtccaattcaagcagtctct
ggcattagcagggatgttaatgtttcagtaggatcccagcaatcagatacaaaggattct
cctccttcttctcatatcaccagaactagtgatgaaaagtcaagcattgggaagacaagt
tccgtagaatctgcatccattgttgaactgcaaactcacaatacatctaatgaagaaagg
acaactgtgcaagaaaatcaggagttactggatgaagtccctttagaagaaacactgaaa
aatgaaacaactaatgcagagagtttagaaggatcttctgacataatagaagctgtgact
gtttcctctgattcttttaaaacaactggcaaaaatataatgactgtcaatgaagtaact
gcttccataagttctccttcagaagaggatgcttcagaggtgccagaattattggataag
tctgtagtagaggaagaagaagatgatgattatgtagaactgaaggtagaaagtattcct
actgaggaagccagtctccctacagagctccaagataacagtttgtctccagctgcttct
gaagccaatgaaagaatggacatgtttagtaatgaccacaagttaatatttcaagaggaa
caacctgtaagtaagaaacaaactgacactgaaactcgagatcctaaagattctgaagtc
ttgactatgacagcatcagggtcttcagctacctcaccaggaactactgcttcccaagca
actgttcaatcagatgttggtcagatgctggaggtaggggagaagactaacctcgccgga
gaaaccaaactacatagtgattctaatagtagtaccttcgagtctcctactacttctgag
cagaggattgctaagttggatgcttccagtgttgctacagatactgagagattggaattg
aaggccactacaaacatggaagcatctcagcgtcatcagcctgtgcttgagatgtcaagg
caacaggagcagccagggcagggaacagcaccagatgcagttaatggacaaaggaggaat
tccagatctatgttccgtattccagagttcagatggtctcaagtgcatcagcgtttgctc
actgatctattattttcaatagaaacagacatacagatgtggagaagccattcaacaaag
acagtaatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaattcat
ctcatctctcaagtgatggacaatatggtcatggcttgcgggggtatactgccattgctt
tcagctgctacatcggctacacatgagctggagaatattgaacctactcaaggcctttca
atagaagcctctgtgacatttttgcagagactaatcagccttgtggatgttcttatattt
gcaagttctcttggctttactgaaattgaagctgaaaaaaatatgtcatctggaggaatt
ctgcggcagtgtctccgactggtgtgtgcagtggccgtaaggaattgcttagagtgtcaa
cagcattcacagctgagaactaaaggcaaagcagggaaagtccagaaaacaacacacggc
ctgattcccatggggaaatctgcagcaaagagtccggtggatattgtaactggtggtata
tctccagtaagagattttgacaggcttctacaagacatggatattaatcgacttagggca
gttgtcttcagagacatagaggatagcaaacaagcacagtttttagccttggcagttgta
tactttatctctgttcttatggtctcgaagtacagagacattttggaaccccaaaatgaa
aggcatagccagtcttttcaggaaactggtagtgaaagcgggaatttatcactccctgat
ggagaaaactcaccagcagcattcagtccattaactccagcatccatggaagaatctgaa
agtgcatcatctgctcgaaggagggactcaggcattggggaagaaatggctactggttta
ggaagcaatgtggacgtagctcctcctgtagcacctccaagtgtcagtgcaggcccagat
gccatcagtgaggtgctgtgcactctttcttcagaagtcagtaaatctcaggagaccaaa
agtgatggagaaaatgaattggataacaagggtgcaccatcagttcccgtttcaaaaaat
atcaatgtgaaggacattctccgaagcttggttaacataccaggagatggagtcacagtg
gatcctgcccttctgccaccagcctgccttggagctcttggtgatctatctgttgagcag
cctgtgcagttcagatcttttgacagaagtgtcatcgtggcaacaaaaaaatcagcagtc
ttaccttcaacacttacaagtatacctaccaatgctgtcagtgtggtttcttcagtagat
tcagcccaagcctcagatgtggggggagaatcacctggtggtagatcatctaatgcaaaa
ttacctgcagttccaacagttggttcagttccacaagaccaagtttcgaatatgagtatt
acagagaggctcgaacatgctttggaaaaggcagctcctcttctacgagagatatttgta
gattttgcaccttttctttctcggacacttttgggtagccatggacaagaactgcttata
gaaggaacaagtctggtttgcatgaagtctagtagttcagttgtggaattggttatgcta
ctgtgttctcaggagtggcagaattctattcagaagaatgcaggccttgcttttattgaa
cttgtcaacgaaggaaggttgcttagccaaaccatgaaggatcacctagtaagagtagcg
aatgaagctgaatttatcctgagcaggcagcgagcagaggatgttcacagacatgcggaa
tttgagtcactgtgtgcccagtattcagcagacagacgagaagatgagaagatgtgtgat
catttgataagagcagccaaatatcgagaccatgtgacagcaactcagctaatccagaaa
attatcaacattctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcct
cgtgagttctggcgcctcgactactgggaagatgacttgcggcgccggcgacgatttgtg
cgtaaccctctaggatcgacacatcctgaagcgacactaaaaacagccgtggaacatgct
gcagatgaagatattcttgctaaaggaaaacagtccatcaagagtcaggctttaggaaat
cagaactcagaaaacgagatcctcctggaaggcgacgacgatactctgtcatccgtggac
gagaaagatttagagaatcccaccggtcctgttagcctgagcacaccagctcagcttgtg
gccccctctgttgtagtaaagggcactctttctgtcacctcctccgaactctattttgag
gtggatgaagaagaccctaacttcaagaaaattgaccccaagatcctggcatatacagaa
gggctgcatggaaaatggctgttctcagagatacgatcgatcttttctcgtcgttatctt
ttgcaaaatacagccctggagatctttatggcaaacagagttgctataatgttcaacttc
ccagaccctgcaacagtaaagaaagtggttaattatctacctcgtgttggtattggaacc
agttttggattgcttcaaaccaggcgtatctcattagctagtcctcgtcaactttttaaa
gcttctaatatgacccagcgatggcaacatagggagatttcaaattttgagtacttgatg
tttctcaacacaatagcaggacggagttacaatgacttaaatcagtacccagtgtttccc
tgggtcattactaattatgaatcagaagaactggatcttactttgccaagtaacttcaga
gatttgtccaagccaataggagctttgaatccaaaaagagcagcattctttgcagagcgt
tatgaatcctgggaagacgatcaagttccaaagttccactatggcactcattactcaact
gcaagttttgttcttgcatggctgctaagaatagaacccttcacaacttctttcctaaat
ttacaaggaggaaaatttgatcatgcagatcgaactttttcatcgatttccagagcttgg
cgaaacagtcagcgtgatacatctgatattaaggagttgatccctgaattttattatctc
cctgagatgtttgtcaacttcaataattataatcttggagtgatggatgatgggacagta
gtgtctgatgttgaacttcctccttgggccaaaacctcggaagaatttgttcgcataaac
agattggctctggagagtgaatttgtttcctgccagcttcaccagtggattgatctcatt
tttggctataaacagcaagggccggaggctgttcgagccctcaatgtgttctattacctg
acctatgaaggagctgtcaatctgaattcaataactgattctgtattgagagaggctgtt
gaagctcaaatccgaagttttgggcagacgccttctcagctcctcatagagccccatcct
cccagaggttctgccatgcaagcgagtccattgatgttcacagaccaagctcagcaggat
gttatcatggttctaaagttcccctccaactcccctgtcactcacgtggcagccaacacc
cagcctgggttggcaactcccgctgtgatcacagtcactgctaacaggctatttgccgtg
aacaagtggcacaaccttccggctcatcaaggtgctgtacaagaccagccatgccagctg
ccagtggaaatcgatcctctcatagccagcaatacaggaatgcacaggaggcaaatcact
gaccttttagaccaaagtattcaagtgcattcccagtgctttgtcatcacttcggacaac
cgctacgttctcctctgtggcttctgggataagagttttcgagtctactctgcagacaca
ggaaaattgatccaagtggtgtttggccattgggatgtcgtcacttgcctcactcgttca
gagtcatatattgggggaaattgctacattctctcagggtcacgtgatgcaacccttctg
ctctggtactggaatggaagaagcagtgggattggcgataatccaggcagtgagaccacc
actcctcgggccatcttgacaggccatgactctgagatcacttgtgctgccgtctgcgct
gagctcggcctcgtgttaagcggttctaaagaaggaccatgtctcatacattccatgaat
ggagacttgttaaggactttggagggtcctgaaaactgcctgaaaccaaaactcatgcag
gcttccagagagggtcactgtgtcatattctatgaaaatggcttcttctgtacattcagt
gtgaatggaaaactccaggccaccgtggaaacagatgataacataagggctatccagctg
agccgggatgggcagtacctgctcaccggaggagacaatggtgtggtcatggtctggcag
gtgtctgacctcaagcagctcttcgcctatccaggctgtgatgccgggatccgggccatg
gcactgtcttacgaccagaggtgcatcatttctggcatggcctcaggaagcattgttctg
ttctacaatgactttaaccggtggcatcatgaataccaaacccgctactga
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integrated database retrieval system
