Orcinus orca (killer whale): 101272327
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Entry
101272327 CDS
T05247
Symbol
GFAP
Name
(RefSeq) glial fibrillary acidic protein isoform X2
KO
K05640
glial fibrillary acidic protein
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
101272327 (GFAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101272327 (GFAP)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oor04812
]
101272327 (GFAP)
Membrane trafficking [BR:
oor04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
101272327 (GFAP)
Cytoskeleton proteins [BR:
oor04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
101272327 (GFAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
SRRM_C
Motif
Other DBs
NCBI-GeneID:
101272327
NCBI-ProteinID:
XP_004286011
LinkDB
All DBs
Position
19:38972297..38982477
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AA seq
479 aa
AA seq
DB search
MRGTLPMAGLRPSPTHLGYARGCCQGQPGPGQARSSSIKPAHPRSRQSQDRMERRRVTSA
ARRSYVSSSEIGVGGRRLGPGTRLSLARMPPALPARVDFSLAGALNSSFKETRASERAEM
MELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRELRLRLDQLTAN
SARLEVERDNLAQDLGTLRQKLQDETNLRLEAENNLAAYRQEADEATLGRLDLERKTESL
EEEIRFWRKIHEEEVRELQEQLAQQQVHVEMDVAKPDLTAALREIRTQYEAVASSNIHEA
EEWYRSKFADLTDAAARNAELLRQAKHEANDYRRQLQALTCDLESLRGTNESLERQMREQ
DERHAREAASYLEALARLEEEGQSLKDEMARHLQEYQDLLSVKLALDIEIATYRKLLEGE
ENRITIPVQTFSNLQIRETSLDTNSVTEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcactctccccatggctgggctgcggcccagccccacccacttaggctatgcc
agggggtgttgccaggggcagcctgggccgggccaggccaggtcctcctccataaagcca
gcacatcccaggagcaggcagagccaggacagaatggagaggagacgggtcacctcagcg
gctcgccgctcctatgtctcctcctcagagataggggtggggggccgccgcctgggtcct
ggcacccgcctgtccctggctcgaatgccgcctgcactcccggcccgggtggacttctcc
ttggccggggcgctcaactccagcttcaaggagacccgggccagtgagcgggcggagatg
atggagctcaatgaccgcttcgccagctacatcgagaaggtgcgcttcctggaacagcag
aacaaggcgctggctgccgagctgaaccagctgcgggccaaggagcccaccaagcttgcc
gacgtctaccaggcggagctgcgcgagctgcggctgcggcttgatcaacttaccgccaac
agcgcccggctcgaggtggagagggacaatctggcgcaggacctgggcaccctgaggcag
aagctccaggatgaaaccaacctgaggctggaggctgagaacaacctggctgcctatcga
caggaggcagatgaagccaccctgggccgtctggatctggagaggaagactgagtctctg
gaggaggaaatccggttctggaggaagatccatgaggaggaggtgcgggagctccaggag
cagctggctcagcagcaggtccacgtggagatggatgtggccaagcccgacctcacagca
gccctgagagagatccggacacagtacgaggcagtggcatccagcaacatacatgaggcg
gaggagtggtaccgctccaagtttgcggacttgacggacgccgctgcccgcaacgcggag
ctgctccgccaggccaagcacgaggccaacgactatcggcgccagctgcaggccttaacc
tgcgacctggagtccttgcgcggcacgaacgagtccctggagaggcagatgcgggagcag
gacgagcgccacgcgcgggaggcggcgagttacctggaggcgctggcccggctggaagag
gaggggcagagcctcaaggacgagatggcccgccacctgcaggagtaccaggacctgctc
agcgttaaactggccctggatatcgagatcgccacctacaggaagctgctggagggcgaa
gagaaccgcatcaccattcctgtgcagaccttctccaacctgcagatccgagaaaccagc
ctggacaccaattccgtgacagaaggccacctcaagaggaacatcgtggtgaagaccgtg
gagatgcgggacggagaggtcattaaggagtccaagcaggagcacaaggatgtgatgtga
DBGET
integrated database retrieval system
