KEGG   Orcinus orca (killer whale): 101272380
Entry
101272380         CDS       T05247                                 
Symbol
SNRPA1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A' isoform X1
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101272380 (SNRPA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oor03041]
    101272380 (SNRPA1)
Spliceosome [BR:oor03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101272380 (SNRPA1)
 Complex B
    101272380 (SNRPA1)
 Complex C
   U2 SnRNP specific factors
    101272380 (SNRPA1)
SSDB
Motif
Pfam: LRR_9 LRR_4 DHU1_N LRR_8 LRR_R13L1-DRL21 LRR_14
Other DBs
NCBI-GeneID: 101272380
NCBI-ProteinID: XP_004278416
LinkDB
Position
2:complement(54727332..54740725)
AA seq 255 aa
MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF
PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI
LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT
FNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGPTD
DGEEEMEEDTVTNGS
NT seq 768 nt   +upstreamnt  +downstreamnt
atggtgaaactgacggcggagctgatagagcaggcggcgcagtacaccaacgccgtgcgg
gaccgcgagctggacctgcgggggtataaaattcctgtcattgaaaatctaggcgctacc
ttagaccagtttgatgccattgatttttctgacaatgaaatcaggaaactggatggtttt
cctttgttgagaagactgaaaacattattagtgaacaacaacagaatatgccgtataggt
gagggacttgatcaggctctgccctgtctgacagaactcattctcaccaacaacagtctt
gtggaattgggtgatctggaccctttggcatctctcaaatcattgacttatttaagtatt
ctaaggaatcctgtaacaaataagaagcattacagactatatgtgatttataaagttcca
caagtcagagtactggatttccagaaggtgaaactaaaagagcgtcaggaagcagagaaa
atgttcaagggcaaacggggtgcacaacttgcaaaggatattgccaggagaagcaaaact
ttcaatccaggtgctggtttgccaactgacaaaaagaaaggtgggccatctccaggggat
gtggaagcaatcaagaatgctatagcaaacgcatcaactttggctgaagtggagcggctg
aagggcttgcttcagtccggtcagatacctggcagagaacgcagatcaggccccactgat
gatggtgaagaggagatggaagaagacacagtcacaaatgggtcctga

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