Orcinus orca (killer whale): 101272526
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Entry
101272526 CDS
T05247
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101272526 (LINGO1)
Membrane trafficking [BR:
oor04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
101272526 (LINGO1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
101272526
NCBI-ProteinID:
XP_004276386
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Position
2:complement(84038854..84240932)
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AA seq
620 aa
AA seq
DB search
MQVSERMLAGGVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIN
TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGN
LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
KSDAGISSADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcgagaggatgctggcggggggcgtgaggagcatgcccagccccctcctg
gcctgctggcagcccatcctcctgctggtgctgggctcggtgctgtcaggctcagccaca
ggctgcccgccccgctgcgagtgctccgcccaggaccgcgcagtgctctgccaccgcaag
cgctttgtggcggtgcctgagggcatccccactgagacccgcctgctggacctgggcaag
aaccgcatcaaaacgctcaaccaggacgagtttgccagcttcccgcacctggaggagctg
gagctcaatgagaacatcgtgagcgccgtggagcctggtgccttcaacaacctcttcaac
ctccggacgctggggctccgcagcaaccgcctgaagctcatccccctgggcgtcttcacc
ggcctcagtaacctgaccaagctggacatcagcgagaacaagatcgtcatcctgctggac
tacatgttccaggacctgtacaacctcaagtcactggaagtcggcgacaacgacctcgtc
tacatctcccaccgagccttcagcggcctcaacagcctggagcagctgacgctggagaaa
tgcaacctgacctccatccccaccgaggcactgtcccacctgcacggtctcattgtcctg
cggctccggcacctcaacatcaatgccatccgggactattccttcaagaggttgtaccgg
ctcaaggtcttggagatctctcactggccctacttggacaccatgactcccaactgtctc
tatggcctcaacctgacgtccctgtctatcacgcactgcaacctgactgctgtgccctac
ctggcggtgcgccacctggtctatctccgcttcctcaacctctcctacaaccccatcaac
accattgagggctccatgttgcatgagctgctaaggctgcaggagatccagctggtgggt
gggcagctggccgtggtggagccctacgccttccgtggcctcaactacctgcgcgtgctc
aatgtctccggcaaccagctgaccacactggaggagtcggccttccactcggtgggcaac
ctggagacgctcatcctggactccaacccactggcctgcgactgccggctcctgtgggtg
ttccggcgccgctggcggctcaacttcaaccggcagcagcccacgtgtgccacgcccgag
ttcgtccagggcaaggagttcaaggacttccctgatgtgctcctgcccaactacttcacc
tgccgccgtgcccgcatccgggaccgcaaggcccagcaggtgtttgtggatgagggccac
acagtgcagttcgtgtgccgggcagatggcgacccgccgcccgccatcctctggctctcg
ccgcgcaagcacctggtctcggccaagagcaacgggcggctcacggtcttcccagatggc
acgctggaggtgcgctacgcccaggtacaggacaacggcacttacctgtgcatcgcggcc
aacgcgggcggcaacgattccatgcctgcccacctgcacgtgcgcagctactcgcccgac
tggccccatcagcccaacaagaccttcgccttcatctccaaccagccgggcgagggagag
gccaacagcacccgcgccaccgtgcctttccccttcgacatcaagaccctcatcatcgcc
accaccatgggctttatctctttcttgggcgtcgtcctcttctgtctggtgctgctgttt
ctctggagccggggcaagggcaacaccaagcacaacatcgagattgagtatgtgccccgc
aagtcggacgcaggcatcagctccgccgacgcacctcgcaagttcaatatgaagatgata
tga
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