Orcinus orca (killer whale): 101273123
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Entry
101273123 CDS
T05247
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101273123 (RTF1)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
101273123 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
101273123
NCBI-ProteinID:
XP_004274020
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All DBs
Position
2:complement(116570388..116619398)
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AA seq
710 aa
AA seq
DB search
MRGRLCVGRAAAAAAAVAVPLAGGQEGSPGGVRRGSRGTTMVKKRKGRVVIDSDTEDSGS
DENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSNSDDEWTFGSNKNKKKGKARKI
EKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHD
GYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKKRFEIRKKLKTAKKKEKKEKK
KKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELL
AKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELN
RVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQLGGT
RTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIK
EALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLN
ELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRRQCK
PTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQGKDKDLNSKSASDLSEDLFK
VHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctttgtgtgggtcgagcagcggcggcggcggcggcagtggcggtccca
ctggcaggcgggcaagaggggagtccgggcggcgtccggcgtgggagccgggggaccacg
atggtaaagaagcggaaaggccgcgttgtgatcgactcagacacggaagacagcggcagc
gacgagaacctggatcaggagctcttgtccctggcaaagcggaaacgaagtgactctgaa
gagaaggagccgcctgttagtcagcctgcagcctcctcagactcggagacgtctaacagt
gatgatgagtggacttttgggagcaataaaaataagaagaaaggaaaagccagaaaaata
gagaagaaaggaaccatgaagaaacaggccaataaaactgcttcctcaggcagttcggac
aaagacagttcagctgagagctcagcccctgaggaaggtgaagtgtcagattctgacagc
aacagctcctcctccagttcagattcagactcttcctcagaagatgaggaattccatgat
ggctatggagaagacctcatgggagatgaggaagacagggcccgtctggaacagatgaca
gaaaaggagagagagcaagaactgttcaaccgcatagagaagagggaggtgttaaaaaaa
agatttgaaatcaggaaaaaactgaaaacagccaaaaagaaagaaaagaaagaaaaaaag
aaaaagcaagaagaggagcaggaaaagaagaaactgacacagattcaagaatctcaggta
acatcccataacaaggaacgacgttccaaacgggatgagaaactagataagaaatctcaa
gccatggaggagctaaaagcagagcgagaaaaacggaagaacagaacagctgagctcctc
gccaagaaacagccattaaaaaccagtgaggtgtactctgacgatgaggaggaggaggaa
gatgacaagtccagtgaaaagtcagaccgctcatcccgaacatcgtcatctgatgaagaa
gaggagaaagaagagatccctccaaaatcacaaccggtctccttaccagaggaactgaat
cgggttcgattatcacggcataagctggaacgttggtgtcacatgcccttctttgctaaa
actgtcacaggatgttttgtacggattggcattggaaaccacaacagcaaaccagtttac
cgggttgctgaaatcacgggtgtagtggaaaccgccaaagtttaccagcttggtggcacc
agaacaaacaaagggctacagctacggcacggcagtgaccagcgagtgttccgcctagag
tttgtctcaaaccaggagtttactgaaagcgaattcatgaagtggaaagaagcgatgttc
tctgctggcatgcagttgcccactctagatgaaatcaataagaaggaattatctattaaa
gaagctcttaattataaattcaatgaccaggacattgaagagattgtaaaagagaaagaa
agattcaggaaagctccacccaactatgctatgaagaaaacgcagctcctaaaggaaaag
gccatggctgaggacctgggggatcaggacaaggccaaacaaatccaagaccagctgaac
gagctggaggaacgagcagaggccctggaccgccagcggaccaagaacatatctgcgatc
agttacatcaaccagcggaaccgggagtggaacattgtggagtctgagaaggcccttgtg
gctgaaagtcacaacatgaaaaaccaacagatggatccttttaccaggcgacagtgtaaa
cctaccatcgtttctaattccagagacccggctgttcaagctgccatattggcccagctg
aacgcaaaatacggttctggagtgttaccagatgctccaaaggaaatgagcaagggtcag
ggaaaggataaagatttgaattctaagtcagccagtgacctctcagaagacttgttcaaa
gtacatgatttcgacgtgaagattgatttacaagttcccagctcagagtcaaaggctttg
gccatcacctccaaggctccgccagccaaggatggagctccaaggagatctctgaacttg
gaagactacaaaaaacgacgagggcttatttga
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