Orcinus orca (killer whale): 101273168
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Entry
101273168 CDS
T05247
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X4
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101273168 (CHD9)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101273168 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
101273168
NCBI-ProteinID:
XP_004264943
LinkDB
All DBs
Position
20:complement(31063533..31307770)
Genome browser
AA seq
2885 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISSQNGSPFHQQGHSHSMHQTKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPPQINNASTSQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQSSAVLAPNHT
NQTLSDFTGSNSFSPHRAIKQESTQHMLNPNTSLHSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DESAFGQDNSSHVLDHDLDRQFTSHLVTRPSDMAQTQLHTQARSWHSSLSNHQHLHDRNR
LCLQRQPPSSKKSDGPGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDAEQVPQHAFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
KGAIKIKKHSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIIKKEISPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCERSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKDELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDPK
GIILEDVKVKSENLKEEPQFSEEESMTSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHVKAYDE
ESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVLK
GKWPSARRSYDANAVASFYTTKLLDSSGAATEYSEPSVPTPAGAGVKEEHDQSTQMSKEG
GLKLTFQKQGLAQRRPLDSEDGALGQQQYLTRLRDLQGASETSLASFPKSMPISGTPIQS
TLGANGVLLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVTLGLTTSQISTGINPALS
YTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPRMQLH
EGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENTEY
GVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKATAAAAATTATSI
SGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPAGLSSGGEAKNVAAMFPM
LLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSTELEGKKERTESQNSENGGESSVSSS
PSTSSTAALSAAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSNTFDVQKNKNS
DLGSSKSVEVKEEDSRVGDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTPSSSEDSD
SSNED
NT seq
8658 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctgtttggtgagaccttagaa
ggtttgtcagacgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgttcaaggtactcca
acacatcagaagatgactgattatgaacagttaaatcagtttgattcaatgaaatttcac
caagttaatcagtcttttggtagcccagctgaacatgtgttatctccacactctcagttt
aactgttctccgatccaccctcagaaccagcccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctactagcatttcaagtcaaaatgggtctcct
tttcaccaacaaggacattctcactctatgcatcaaactaaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcgctacgctcacaa
caaaacagaaataatcttaacccagggcaaaattctcttagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaattaataat
gcatctacttcacagcagtccctttcgatgcagcaattttctcaaacgtcaaatccttca
gtacacttcctgaagtgtagcaatcatcaagaaggaaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatgtgtcaccaaatagtcttcttcagtcctctgcagttcttgcacctaatcataca
aatcagactttatctgattttactgggagtaattccttttcacctcatagggcaatcaag
caagaatcgactcagcatatgctaaatcccaatacatcgctgcattcaaataacttccaa
atgttgcattcatcacatcctcagggtaattacagcaattcaaaattatctcctgttcac
atgaacttcccggatcctgttgactcaggaactcaaatgggccatttcaatgatcatgta
gaaactaatggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaact
gagccgttcacaggacttgacccagaagacctccttcaggagggtctccttccccaattt
gatgagtcagcatttggacaagataattcaagtcatgttttagatcatgaccttgatcgg
caatttacttcacatctcgtaacacggccttctgatatggctcaaactcagttgcatact
caggctcggagttggcattcatcactttctaatcatcagcatttacatgacagaaatcgc
ctatgtttacagcgacagcctccatcttccaagaagagtgatggtcctgggacatatact
aagttgcagaatacccaggtgaggatcatgtctgagaagaagcagagaaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaag
gagcgtggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagaaggatgaaatctaagccaaaggacaaagag
agcaaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcatt
attacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgatgca
gagcaggtgccacagcatgcattcaaagaggaagactctcaaaaaagaagatcaaatcga
caaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggtt
aaaggcgctataaaaataaaaaagcattcagctcctttacctggtgaacagcctttacag
ttatttgtggagaatccgagtgaagaagatgctgcaattgtggacaaaatactatcttct
agaattataaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagaacagcagcttctgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgcagacatggaagaagaaccatttaacccagactacgttgaagtagacagagta
ttagaagtctctttttgtgaagataaagatactggtgagcctgttatttactacttagta
aagtggtgctcattaccatatgaagatagtacttgggaactaaaagaagatgtagatctt
gcaaaaatagaagagtttgaacagttgcaagcttcacggcctgacacaagacatttggac
cgtcctccttctaatatttggaaaaaaatagatcaatccagggattataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaactggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
actattgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttat
catgggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactca
caggggcgaatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggaggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaattgtaaacttctagaaggtctgaaactcatgaatctg
gagcacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagt
cttcttcactttctggaacccttaaggtttccttctgaatcaacgttcatgcaagaattt
ggggatctgaaaacagaggaacaggtgcagaaacttcaggctatcttgaaaccaatgatg
ttgagacgattgaaagaagacgtggaaaaaaagttggcacctaaggaagaaaccatcatt
gaagtggaacttactaacattcagaagaaatactaccgggctattctggagaagaacttt
tcgtttttatccaaaggagcagggcagactaatgtacccaacttggtcaataccatgatg
gagctcaggaagtgctgtaatcacccatatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtccttattgataaattgcttcctaaaatgaaagcaggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgatatcctggaggactatctt
atacataaaagatatttatatgagcgaattgatggaagagtcagagggaatcttcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgtctttcttctgtgtacc
cgagctggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattct
gattggaatcctcaaaacgaccttcaggcccaagctcgttgccacagaattggtcagaat
aaagcagttaaagtctaccgactagtaactcgtaactcatatgaaagagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtattacagagcatgagtggaagagaa
agtaatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaaga
ggtgcttatggtgccattatggaagaagaagatgaaggctctaaattctgtgaagaagat
attgatcagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtggg
tcaacatttgccaaggcaagttttgtggcatctggaaatcgaacagatatttccttagat
gatcccaacttctggcaaaaatgggcgaaaaaggcagaaatagatatagatgccatcagt
ggtagaaacagcttggttattgacactccaagaattaggaagcaaacaagacccttcagt
gctacaaaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagccc
aaactccggagaccctgtgagcgttcgaatggctatggaagaactgaatgctttagagta
gagaaaaatctgctagtttatgggtggggccgatggagagagattctgtctcatggccgt
tttaaaaggcagctaaatgagcacgatgtggaaataatttgccgagccctcttagcttat
tgccttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattact
ccaaccgaagatgggcagacacgagagctacaaaatcatctaggtctgtcagcccctgta
cccagaggtcgaaaagggaagaaagtaaagactcagacaagctcatttgatatacaaaaa
gcagaatggcttcgaaaatacaatcctgagcagctacttcaagatgaaggctacaaaaaa
catataaaacaccactgtaataaagttttgcttcgtgtaagaatgctgtattatctaaag
caagaagtcattggaaatgagtgccagaaagtgtttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggattttgat
gctgataagtcactccttattggagtttttaaacatggttatgaaaaatataacactatc
cgagcagacccggcattatgcttcttggaaagagtgggaaaacctgatgagaaagcagtt
gctgcagaacagagggcgaacgattatatggatggggatgtggaagatccagaatacaaa
cctgccccagctatctttaaagatgatatagaggatgatgtttcctcaccaggagatctt
gttatagcagatggagatggtcaactgatggagggtgataaaatttattggcctactcag
tcagctttaaccacacgtttgaggcgtctcatcactgcatatcagcgtactaataaaaac
agacaaatccagcagatacaacctactttctcagtgcctgccagtgttatgcagcctctt
tatgaagaagccactcttaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaagaagagaagaagctgacttttatagagttgtgtctacatttggagtggtgtttgat
cctgacagaggccaatttgattggacaaaatttagagctatggctaggctacataagaaa
actgatgatagtttggagaaatatttgtatgcattcatgtctatgtgtcggagggtttgt
cgtcttccttccaaagatgaattggtggatccaaatatttttatccagccaatcacagaa
gaacgtgcttctaggactttatatcgcattgaacttctaaggaaagtaagggaacaggcc
ctccgacatccacagttatttgagcgcttgaagctttgccatccaaatccagacttacca
gtctggtgggagtgtggccctcatgatagggacttgctcattggagctgctaaacatggg
gtgagccgaacagactatcacattcttcgtgatcctgaactctcatttatggcagctcaa
aggaactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagatcctaaa
ggtattattctagaggatgtgaaagttaaaagtgaaaaccttaaagaggagcctcagttt
tctgaagaagaatctatgacttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagagcctctaactccaaacccagcttct
aagaagcagcgagtccacaaaagaggatcagagtctagttctgattctgactctgattct
gagagatcgtcctgttcttccagatcatcttcttcttcgtcttcctcttcttcttgttcc
cactctcgatcaggctctagctcttcttcttcctcctcttgttcttcagcatcatcttca
tcctcatcctcgtcctcctcttcctcatcatcctcctcatcttcatcagaagaaagtgac
agtgaagaagaggaagtccaaaagcgagaaggtacccctcacgtgaaagcctatgatgaa
gaaagcgttgcatcactgagcactacccaggatgagacccaggatagtttccagatgaac
aacgggaccccagagtctgcttacatcctgcaaggtggatacatgctggcagcttcgtac
tggccaaaggaccgtgtgatgatcaaccggttggacagtatttgtcaaacagtcctgaaa
gggaagtggccttcagctagaagaagttatgatgccaatgcagtggcttctttctatacc
acaaagctgctggacagctctggcgcagctacagaatatagcgagcccagcgtgcccact
cctgcaggtgctggcgttaaagaagaacacgatcagtcaacacagatgtcaaaggaaggt
ggtttgaagttgacatttcagaagcaagggcttgctcagagaaggccattggacagtgaa
gatggtgctctagggcagcagcagtacctcactcgacttcgggaccttcaaggtgcgtca
gagaccagcctcgccagttttccgaaatccatgccaatatcaggtactcccattcaatca
acccttggtgccaatggagttttattagacaaccagcctgtagtcaaaaaaaggcgggga
aggaggaagaatgtagaaggtgttgacatcctctttttcaacagaaataaaccacctaat
catgttactttaggcttaaccacctcacagatttctacagggataaatccagcactatcc
tatactcaacctcaaggaattcctgatacagaaagtcccgttccagttattaatcttaaa
gatgggacaagacttgcaggcgatgatgcaccgaagagaaaggatttggaaaaatggctt
aaggagcacccaggttatgtggaagatttaggagcttttattcctagaatgcagctccat
gaggggagacccaagcaaaaaaggcatcgttgcagaaaccccaataaactagatgtgaat
agtctcactggagaagaacgtgttcagctgattaacagaagaaatgccagaaaggttgga
ggtgcctttgctccccctctgaaagatttatgtcggttcctgaaagaaaatacagaatac
ggagtagctcctgaatggggagatgttgttaagcagtctggatttcttccagaaagtatg
tatgaacgtattctcactggtcccgttgtgagagaggaagtaagcaggcgagggagacgg
cctaaaagtggaattgcaaaggccactgcagcagcagcagctacaactgccaccagtatt
tcaggcaatcctttattagccaatggattacttccaggtgtggacctcacaactcttcag
gccttacaacaaaacctacaaaacttgcagtcactgcaagtaactgcagggctgatggga
atgcctgctggcctttcttctggaggagaagctaaaaacgtggctgccatgttccccatg
ctgctgtcaggaatgactggattgccaaatctgttgggcatgggaggactcctgacaaag
cctacagaatctggaacagaagaaaaaaagggaaatgactctacggagctagaaggaaaa
aaagaaaggacagagagccaaaattcagagaatggtggtgaaagctctgtgtcaagttct
ccttcaacatcctctactgctgcattaagtgcagctgcagctgccaacccgttagctctt
aacccactattactatctaatatactttatccagggatgcttctcactccaggccttaat
cttcatattccaactttgtcccagtccaatacttttgatgtacagaaaaataaaaacagt
gacttaggctcatctaagtctgtagaagtaaaggaagaagattccagagttggagatcag
gaagacaaagggggaactgaaccgagtcctctcaatgaaaacagcacagatgagggttca
gagaaagctgatgcttcatctggatctgatagtacaccatcgtcatctgaggattcagat
tctagtaatgaagactga
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integrated database retrieval system
