Orcinus orca (killer whale): 101273535
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Entry
101273535 CDS
T05247
Symbol
PSMC4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X2
KO
K03063
26S proteasome regulatory subunit T3
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03050
Proteasome
oor05010
Alzheimer disease
oor05012
Parkinson disease
oor05014
Amyotrophic lateral sclerosis
oor05016
Huntington disease
oor05017
Spinocerebellar ataxia
oor05020
Prion disease
oor05022
Pathways of neurodegeneration - multiple diseases
oor05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
101273535 (PSMC4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
101273535 (PSMC4)
09164 Neurodegenerative disease
05010 Alzheimer disease
101273535 (PSMC4)
05012 Parkinson disease
101273535 (PSMC4)
05014 Amyotrophic lateral sclerosis
101273535 (PSMC4)
05016 Huntington disease
101273535 (PSMC4)
05017 Spinocerebellar ataxia
101273535 (PSMC4)
05020 Prion disease
101273535 (PSMC4)
05022 Pathways of neurodegeneration - multiple diseases
101273535 (PSMC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oor03051
]
101273535 (PSMC4)
Proteasome [BR:
oor03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
101273535 (PSMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
IstB_IS21
AAA_7
TsaE
AAA_18
AAA_33
Parvo_NS1
AAA_lid_PRS2_C
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
101273535
NCBI-ProteinID:
XP_004271336
LinkDB
All DBs
Position
20:46680644..46689284
Genome browser
AA seq
418 aa
AA seq
DB search
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggagataggcatcctggtggagaaagctcaggatgagatcccagccctgtctgtg
tcacggccccagactggcctgtccttcctggggcctgagcctgaggaccttgaggacctg
tacagccgctacaagaagctgcagcaagagctggagttcctggaggtgcaggaggagtac
atcaaggatgagcaaaagaacctgaagaaggaattcctccacgcccaggaggaggtgaag
cgaatccagagcatcccactggttattgggcagtttctggaggctgtggatcagaataca
gccatcgtgggctccaccacaggctccaactactatgtgcgcatcctgagcaccatcgac
cgggagctgctcaagcccaacgcctcggtggccctccacaagcacagcaacgccctggtg
gacgtgctgcctcctgaggccgacagcagcatcatgatgctcacctcagatcagaagcca
gacgtgatgtacgcggacatcgggggcatggacatccagaagcaggaggtgcgggaggcc
gtggagctcccccttacgcactttgagctctacaagcagattggcatcgaccctccccga
ggcgtcctcatgtatggcccgcccggctgcgggaagaccatgttggcaaaggctgtggct
catcacacgacagctgcattcatccgagttgtgggctcagagtttgtacagaagtacctg
ggtgagggccctcgcatggtccgggacgtgttccgcctggccaaggagaacgcacctgcc
atcatcttcatagatgagattgatgccatcgcaaccaagagattcgatgcccagacaggg
gctgacagggaggttcagagaatcctgctggagctactgaatcaaatggatggattcgac
cagaacgtcaacgtcaaggtgatcatggccacaaacagagcagacaccctggatcctgct
ctgctgcggccgggacgccttgaccgtaaaattgaatttccactccctgaccgccgccag
aagagattgattttctccactatcaccagcaagatgaacctctctgaggaggttgacttg
gaagattatgtggcccgaccagataagatttcaggagctgatatcaactccatctgtcag
gagagcgggatgttggctgtccgagagaaccgctacattgttctggccaaggacttcgag
aaagcatacaagacagtcatcaagaaggacgaacaggagcatgagttttacaagtga
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