Orcinus orca (killer whale): 101273612
Help
Entry
101273612 CDS
T05247
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04137
Mitophagy - animal
oor04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
101273612 (RABGEF1)
04137 Mitophagy - animal
101273612 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101273612 (RABGEF1)
Membrane trafficking [BR:
oor04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101273612 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
101273612 (RABGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KCTD_C
VPS9
BTB_2
DUF5601
zf-A20
BTB_3
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
101273612
NCBI-ProteinID:
XP_033282164
LinkDB
All DBs
Position
16:73437457..73525147
Genome browser
AA seq
783 aa
AA seq
DB search
MVVVTGREPDSRRPDGAMSSSDAEDDFLEPATPTATQAGHALPLLPQEFPEVVPLNIGGA
HFTTRLSTLRRYEDTMLAAMFSGRHYIPTDAEGRYFIDRDGAHFGDVLNFLRSGDLPPRE
RVRAVYKEAQYYAIGPLLEQLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQ
RKARFAKLKVCVFKEEMPITPYECPLLSSLRFERSESDGQLFEHHCEVDVSFGPWEAVAD
VYDLLHCLVTDLSAQGLTVDHQCIGVCDKHLINHYYCKRPIYEFKITWWKKMSLKSERRG
IHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAF
ASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQEPKAPSPSIN
RQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLETMHYKRDLSIEEQSECTQDFYQN
VAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALHWV
TPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKVTKNE
PASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEK
LDAQSLNLSQEDFDRYMSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQLNERQERIM
NEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIRPPNQSLASIDSENVENDKLPPPLQPQV
YAG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggtggtagtcacggggcgggagccagacagccgtcgcccggacggtgccatgtccagc
tcggacgccgaagacgactttctggagccggccaccccgacagccacgcaggcggggcac
gcactgcctctcctgccgcaggagttccctgaggttgtcccccttaacatcggaggggct
cacttcaccacacgcctgtccaccttgcggcgctacgaggacaccatgctggcggccatg
ttcagcgggcggcactacatccccacggatgccgagggccgctacttcattgatcgggac
ggtgcgcacttcggagatgtgctgaatttcctgcgctcgggggacctgccgccccgggag
cgcgtgcgggccgtgtacaaagaggcccagtactatgccatcgggcctctcctggagcag
ctggagaacatgcagccactgaagggggagaaagtgcgccaagcgtttctgggactcatg
ccctattacaaagaccatttggagcggattgtggagattgcccggctgcgcgccgtccag
cggaaggcccgctttgccaagctcaaggtctgtgtcttcaaggaggagatgcccatcacc
ccctacgagtgtccgcttctcagctccctgcgctttgaacggagcgagagtgacggacag
ctcttcgagcaccactgcgaagtggatgtgtctttcgggccctgggaggccgtggctgac
gtttatgacctgttgcactgcctggtcacggacctctcggcccagggcctcaccgtggac
caccagtgcatcggggtgtgtgacaagcacctcatcaaccactactactgcaagcgcccc
atctatgagttcaagatcacatggtggaagaagatgagtcttaagtctgagcgccgagga
attcatgtggatcaatcagagctcctgtgcaagaaaggatgtggttattacggcaaccct
gcttggcagggtttctgctccaagtgctggagggaggagtaccacaaagccaggcagaag
cagattcaggaggattgggaactagcagagcgactacagcgggaggaagaagaggccttt
gccagcagccagagcagccaaggggcccaatccctcacattttccaagtttgaagaaaag
aaaaccaatgagaagacccgcaaggttaccacagtgaagaaattcttcagtgcttcatcc
agggttggatcaaagaaggcagaaattcaggaaccaaaagctcccagtccttctataaac
cggcaaaccagcattgaaacggatagagtgtctaaagagttcatagaatttctcaagacc
ttccacaagacaggccaagaaatctataagcagaccaagctgtttttggaaacaatgcat
tacaaaagggatttaagcattgaggaacagtcagagtgtactcaggatttttaccagaat
gtggctgagagaatgcagactcgtggaaaagtgcctccagaaagagttgagaagataatg
gatcagattgaaaagtacatcatgactcgtctctataaatatgtgttctgtccagaaact
actgatgatgagaagaaagatctcgctattcaaaaaaggatcagagccctgcactgggtt
acacctcagatgctttgtgtccctgttaatgaagaaattccagaagtgtctgatatggtg
gtgaaagcaattacagatatcattgaaatggattctaagcgtgtgccccgggataagttg
gcctgcatcaccaagtgcagcaagcacatcttcaatgccatcaaggtcaccaagaacgag
ccagcttcagctgatgacttcttacccactctcatctacattgttctgaagggcaacccc
ccccgccttcagtccaatatccagtatatcacccgcttctgcaacccaagccgattgatg
actggagaggatggctactatttcaccaacctgtgttgtgccgtggctttcattgagaaa
ttagacgctcaatctttgaatttaagtcaggaagattttgatcgatacatgtctggccag
acttctcccaggaagcaggaatctgagaattggtctcctgatgcttgcttaggtgttaag
cagatgtataagaatttggatctcctgtctcaattgaatgaacggcaggaaaggattatg
aatgaagccaagaagcttgagaaagacctaatagattggacggatggaatcgcaaaagag
gttcaagacattgttgagaaatacccacttgaaattaggcccccaaatcagtctttagct
tctattgactctgaaaatgttgaaaatgataaacttcctccaccattgcaacctcaagtt
tatgcaggatga
DBGET
integrated database retrieval system
