Orcinus orca (killer whale): 101273638
Help
Entry
101273638 CDS
T05247
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101273638 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101273638 (APEX1)
Enzymes [BR:
oor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
101273638 (APEX1)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
101273638 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
101273638
NCBI-ProteinID:
XP_004274108
LinkDB
All DBs
Position
2:125040611..125043797
Genome browser
AA seq
318 aa
AA seq
DB search
MPKRGKKGAVAEDGEEPKIEPEAKKSKAGAKKNEKEAAGEGTVMYEDPPDQKTSPGGKSA
TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQALSGLSHQYWS
APSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEYDAFVLVTAYVPNAGRGLV
RLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPEERHGF
GELLQAVPLTDSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKI
RSKALGSDHCPITLYLAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgtgggaaaaagggagcggtggcagaagacggggaagagcccaagattgag
ccagaggccaagaagagcaaggcgggagcgaaaaaaaatgaaaaagaggcagcaggagag
gggacagtcatgtatgaggaccccccagatcagaaaacctcacccggtggcaaatcagcc
acactgaagatctgctcctggaatgtggatgggcttcgagcctggattaagaagaaaggt
ttagattgggtaaaggaggaagccccagatatcctgtgcctccaagagaccaaatgttct
gagaacaaactaccagctgaacttcaagcactctctggactatcccatcagtactggtca
gctccttcagacaaggaagggtacagtggtgtgggcctactctcccgccagtgcccactc
aaagtctcctatggcattggtgaagaggaacatgatcaggaaggcagagtgattgtggct
gaatatgatgcatttgtgctggtgacagcctatgtacctaatgcaggccgaggtctggtg
cgcctggagtaccggcagcgctgggatgaagcctttcgcaaattcctgaagggtttggct
tcccgcaagccccttgtgctatgtggggacctcaatgtggctcatgaagaaattgatctt
cgcaacccaaagggaaacaaaaagaatgctggcttcactccagaagagcgtcatggcttt
ggggaattgctgcaggctgtgccactgactgacagtttccggcacctctaccccaacacg
gcctatgcctataccttttggacatacatgatgaacgcgcgatccaaaaacgttggttgg
cgccttgattacttcttattgtctcactctctgttgcctgctttgtgtgacagcaagatc
cgttccaaggctctgggcagtgaccactgtcccatcaccctatatctagcactgtga
DBGET
integrated database retrieval system
