Orcinus orca (killer whale): 101273707
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Entry
101273707 CDS
T05247
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor02010
ABC transporters
oor04148
Efferocytosis
oor04975
Fat digestion and absorption
oor04979
Cholesterol metabolism
oor05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101273707 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101273707 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
101273707 (ABCA1)
04979 Cholesterol metabolism
101273707 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101273707 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oor02000
]
101273707 (ABCA1)
Transporters [BR:
oor02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101273707 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
101273707
NCBI-ProteinID:
XP_033287107
LinkDB
All DBs
Position
6:complement(92772177..92954448)
Genome browser
AA seq
2262 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSHRDT
SMKNIRQVLRTLYQIERSSSAGLKFQDFLVDNETFSGFLHHNLSLPRPTVDKILGADVSL
RKVFLQGYQLHLTNLCNGSKLGELIQLGDQEVSMLCSLPKEKLDAAEQVLHSNLDILKPI
LTELNSTSPFPSKELAEATKALLDSLGIVAQELFSMRSWTDMRQEVMFLTNANSSSSPTQ
IYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDAGTFYDNSTTPYCNDLM
KNLESSPLSRIIWKALKPLLVGKILYTPDTPVTKQVMAEVNKTFQELAVFHDLEGMWQEL
SPKIWTFMESSPEMDLVRTLLDSRGNDHFWEQRLEGLDWTAKDIVAFLAKHPEEVQSTNG
SVYTWREAFNETNQAIQTISRFMECVNLNKLEPVATEVLLINKSMELLDERKFWAGIVFT
GIAPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVLTGTEKKTGIYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVF
VFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFA
SLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDAFLYGVMT
WYTEAVFPGQYGIPRPWYFPCTKSYWFGEEGNEKSQPGFSQKGTSEICMEEEPTHLKLGV
SIQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYI
LGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDV
GLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYR
HGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSL
SSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVED
IGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDA
ETSDGTLPARRNRRVFGDKQSCLRPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQV
KGWKLTQQQFGALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLEL
QPWMYNEQYTFVSNDAPEDVSTQELLSALTGKPGFGTRCMEGNPIPDMPCSVGEEEWSTT
PVPQTITELFRNGNWTMENPSPACQCSSDRIKKMLPVCPLGAGGLPPPQRKQNTADILQN
LTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQTLPPSEAVNDAIKQMK
KHLKVAKDSSADRFLSSLGRFMTGLDTKNTVKVWFNNKGWHAISSFLNVINNAILRANLQ
KGENPSEYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLA
LLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIRPRPVKAKLLPLNDEDEDVRRERQRILDGGGQNDILEVKELTK
VYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSSTFKMLTGDTSVTRGDAFLNKNSILS
NIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEREVGKVGEWAIRKLGLVKYGE
KYAGDYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFF
ELAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHLKDLSLHKNQTVVDVALLTSFLQDEKVKESYV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagctgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcctctgtttatcttcctgatcctgatc
tctgtgcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacacttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccgactcctggtgaggctcccggggttgttggaaactttaacaagtcc
attgtgtctcgcctgttctcagatgctcggcgacttcttttgtacagccacagagacacc
agcatgaagaacatacgccaggttctaaggacattataccagatcgagcgttccagctca
gcaggcttgaagtttcaggacttcctggtagacaatgaaaccttctctggattcctgcat
cacaacctctctctgccaaggccaactgtggacaagatactgggggctgatgtcagtctc
cgcaaggtatttttgcaaggctaccagttacatttgaccaatctgtgcaacggatcaaaa
ttaggagagctgattcaacttggtgaccaagaagtctccatgctttgcagcctgccaaag
gagaaactggatgcagcagagcaagtacttcattccaacctggacattctgaagccgatc
ttgacagaactaaactctacatctcccttccccagcaaggagctggctgaagccacaaaa
gctttgctggatagtcttgggattgtggctcaagagctcttcagcatgaggagctggact
gacatgcggcaggaggtgatgtttctgaccaacgcgaacagctccagctcccccacccag
atctaccaggccgtgtcccgcatcgtctgcggccatcccgagggtgggggcctgaagata
aagtcccttaactggtatgaggacaacaactacaaagccctctttggaggcaacggcact
gaggacgacgctggcaccttctatgacaattctaccactccttattgcaatgatttgatg
aagaatctggagtccagtcctctttcccgcatcatatggaaagctctcaagcccctgctt
gttgggaagatcctgtatacacctgacactccagtcacaaagcaggttatggctgaggtg
aataagaccttccaggaactggctgtgtttcatgatctggaaggcatgtggcaagagctc
agccccaagatctggaccttcatggagagcagcccagaaatggaccttgtccggacgctt
ttggacagcagaggcaatgaccacttttgggaacagcgattggaaggcttagattggaca
gccaaagatatcgtggcatttctggccaagcacccagaggaagtgcagtccacgaatggc
tctgtgtacacctggagagaagccttcaatgagaccaaccaggcaatccagaccatctct
cgcttcatggagtgtgtgaacctgaacaagctggaaccagtggcaacagaggttctgctc
atcaacaagtccatggagctactggatgagcggaagttctgggctgggatcgtgttcact
ggaattgctcctggcagtgttgagctgccccatcacgtcaagtacaagatccggatggat
attgacaatgtggagaggacgaataagatcaaggatgggtactgggaccccggtcctcgg
gctgacccctttgaggatatgcggtacgtctggggaggcttcgcgtacttgcaggatgtg
gtggagcaggcaatcatccgggtgctgacgggcacagagaagaaaactggcatctacatg
cagcagatgccttacccctgttacgttgatgacatcttcctgcgggtcatgagccggtca
atgcccctcttcatgacgttggcctggatttactctgtggctgtgatcatcaagggcatc
gtgtacgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacagc
atcctgtggttcagctggttcatcagcagcctcatccccctgctcgtgagcgccggcctg
ctggtggtcatcctgaaattaggaaacctgctgccctacagcgaccccagtgtggtgttt
gtctttctgtccgtgttcgccgtggtgaccatcctgcagtgctttctgatcagcacgctc
ttctccagagccaacctggcggcagcctgtggaggcatcatttacttcatgctgtacctg
ccctacgtcctgtgcgtggcgtggcaagactacgtgggcttcacgctcaagatctttgcg
agcctgctgtctcctgtggcttttgggtttggctgtgagtactttgccctttttgaggag
cagggcattggggtgcaatgggacaacctttttgagagccccatggaggaagatggcttc
aacctcaccacctcggtctccatgatgctgtttgacgccttcctctatggggtgatgacg
tggtacaccgaggctgtgtttccaggccaatatggaatccccaggccctggtatttccct
tgtactaagtcctactggtttggtgaggaaggcaatgagaagagccagcctggtttcagc
cagaagggaacatcagaaatctgcatggaggaggaacccacccacctgaagctgggcgtg
tccattcagaacctgatgaaggtttaccgagatggcatgaaggtggcagttgacggcctg
gccttgaatttctatgagggccagatcacctccttcctgggccacaatggagctgggaag
accaccaccatgtcaatcctgaccgggttgttccctcccacctcgggcactgcctacatc
ctggggaaagacattcgctccgagatgagcaccatccggcagaacctgggggtctgtccc
cagcataacgtgctgtttgacatgctgactgttgaagagcacatctggttttatgcccgc
ctgaaagggctctcggagaagcacgtgaaagcagagatggagcagatggccctagatgtt
ggtttgccgccaagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgcagaga
aagctgtctgtggccttggcctttgttgggggatccaaggttgtcattctggatgagccc
acagccggcgtggacccttactcccgcagaggaatatgggagctgctgctgaaatatcga
cacggccgcaccattatcctgtccacacaccacatggatgaagcggacatcctgggggac
aggattgccatcatttcccatgggaagctgtgctgcgtgggctcctccctgttcctgaag
aaccagctggggacaggttactacctgaccctggtcaagaaggatgtggagtcctccctc
agctcgtgcagaaatagcagtagcactgtgtcgtacctgaaaaaggaggacagtgtttct
cagagcagttctgatgctggcctgggcagtgaccatgaaagtgacacgctgaccatcgat
gtctccgcgatctccaacctcatcaggaagcacgtggccgaggcccggctggtggaagac
attgggcatgagctgacctacgtgctgccctatgaagccgccaaagagggagcctttgtg
gaactcttccatgagattgatgaccggctctcagacctgggcatctccagttatggaatc
tcagagaccaccctggaagaaatatttctcaaagtggctgaagagagtggggtggatgct
gagacctcagatggcaccctaccggcaagacgaaacagacgggtcttcggggacaagcag
agctgtcttcgcccatttactgaagatgatgctgttgatccaaatgattccgacatagat
ccagaatccagagaaacagacctgctcagcgggatggacggcaaaggctcctaccaggtg
aagggctggaaactcacacagcagcagtttggggcccttttgtggaagaggctgctgatt
gccaaacggagtcggaagggattctttgctcagattgtcctgccagctgtgtttgtctgc
atcgccctggtgttcagcttgatcgtgccaccctttggcaagtaccccagcctggaactt
cagccctggatgtacaacgaacagtacacatttgtcagtaatgatgctcctgaggacgtg
agcacgcaggaactcttgagcgctctcaccggaaagcctggctttgggacccgatgtatg
gaaggaaacccaatcccagacatgccctgctcggtgggggaggaggagtggagcaccacc
cccgtgccccagaccatcacggagctcttccgaaacgggaactggacgatggagaacccc
tcccccgcctgccagtgtagcagcgacagaatcaagaagatgctgcccgtgtgtcccctg
ggggctggggggctgcctcctccacagagaaaacagaacactgcggacatccttcagaac
ctgacgggaagaaacatttcggattatctggtgaagacatatgtgcagatcatagccaaa
agcttaaagaacaagatttgggtgaatgagtttaggtacggtggattttccctgggtgcc
agtaattctcaaacacttcctccgagtgaagcagttaatgatgccatcaagcaaatgaag
aaacacttgaaggtggccaaggacagttctgcagatcgatttctcagcagcttgggaagg
ttcatgacaggactggacacgaaaaataccgtcaaggtgtggttcaacaacaagggctgg
cacgccatcagctctttcttgaatgtcatcaacaatgctattctccgggccaacctgcag
aagggagagaaccctagcgagtatgggattactgccttcaatcaccccctgaacctcacc
aagcagcagctctcggaagtggctctgatgaccacatcagtggacgtccttgtgtccatc
tgtgtcatctttgcgatgtccttcgtcccggctagctttgtcgtgttcctgatccaggag
cgggtcagcaaagcgaagcacctgcagttcatcagtggagtgaagcctgtcatctactgg
ctctccaattttgtctgggacatgtgcaactatgtggtccctgccacgctggttatcatc
atcttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgctagcc
cttctactgttgctgtatgggtggtccatcacacctctcatgtacccagcctccttcgtg
ttcaagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcatcggcatc
aatggcagcgtggccacttttgtgctggagctcttcaccaacaataagctgaataacatc
aatgatatcctgaagtcggtgttcttgatcttcccacatttttgcctgggacgggggctc
attgacatggtgaaaaaccaggcaatggctgatgccttggaaaggtttggggagaatcgc
tttgtctcgccgctgtcttgggacttggtgggacgaaacctcttcgccatggccgtggaa
ggggtggtgttcttcctcatcactgtgttgatccagtaccgattcttcatcaggcccaga
cctgtaaaggcaaagcttcttcctctgaatgatgaggatgaagatgtgaggagggagaga
cagagaattcttgatggtggaggacagaatgacattttggaagtcaaggagctgactaag
gtatatagaaggaagaggaaacctgctgtcgacaggatttgcattggcattcctcctggt
gagtgctttggacttctaggtgtcaatggggctgggaaatcatcaactttcaagatgtta
acaggagataccagtgttaccagaggagatgcttttcttaacaaaaacagtatcttatcg
aacatccacgaagtacatcagaacatgggctattgccctcagttcgatgccatcacagag
ctgctgactggaagagagcacgtggagttctttgcactcttgagaggcgtcccggagaga
gaagtcggcaaggttggtgagtgggcaattcggaaactgggcctcgtgaagtatggagaa
aaatatgctggggactatagcggaggcaacaagcgcaagctctcgacggccatggctttg
attggcgggcctcctgtggtgtttctggatgaaccgaccacaggcatggaccccaaagcc
cggcgattcttgtggaattgtgccttaagtatcatcaaggaagggagatcagtagtgctt
acatctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaat
gggcggttcaggtgtcttggcagtgtccaacatctgaaaaataggtttggagatggttat
accatagtcgtacgaatagcagggtccaaccctgacctgaagcctgtccaggagttcttt
gaactcgccttcccgggaagcgtgctgaaggagaagcaccggaacatgctgcagtaccag
cttccttcttcactgtcttccctggccaggattttcagcatcctttcccagagcaaaaag
cgactccacatagaagactactctgtctctcagacaacacttgaccaagtatttgtaaac
tttgccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccag
acagtagtggatgttgcacttctcacatcttttctgcaggacgagaaagtgaaagaaagt
tatgtatga
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integrated database retrieval system
