Orcinus orca (killer whale): 101273711
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Entry
101273711 CDS
T05247
Symbol
GPC6
Name
(RefSeq) glypican-6
KO
K08112
glypican 6
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oor00535
]
101273711 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oor00537
]
101273711 (GPC6)
Proteoglycans [BR:
oor00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
101273711 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oor00537
]
Others
101273711 (GPC6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
101273711
NCBI-ProteinID:
XP_049556980
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Position
18:complement(15218704..16307699)
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AA seq
555 aa
AA seq
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MPSWIGAVILPLSGLLLSLPAGADVKARSCGEVRQAYGAKGFSLADIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSAPENF
NTRFRPYNPEERPTTAAGTSLDRLVTDIKEKLKLSKKVWSALPYTICKDESVTAGTSNEE
ECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVMTNKLKNAYNG
NDVNFQDTSDESSGSGSGSGCMDEVCPTEFEFVTTEAPAVDPDRREVDSSAAQLGHSLLS
GSLVCIALAWQRLCR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttggatcggggctgtgattcttcccctctccgggctgctgctgtccctcccg
gccggcgcggatgtgaaggctcggagctgcggcgaggtccgccaggcgtacggtgccaag
ggattcagcctggcggacatcccctaccaggagatcgcaggggaacacttaagaatctgt
cctcaggagtacacgtgctgcaccacggaaatggaagacaagctaagccagcaaagcaaa
ctggagtttgaaaacctggtggaggagacgagtcattttgtgcgcaccactttcgtgtcc
aggcacaagaaatttgacgaatttttccgagagcttctggaaaatgcagagaagtcacta
aatgatatgtttgtacggacctatggcatgctgtacatgcagaattcagaagtgttccag
gacctcttcacagagctaaaaagatactacactgggggcaatgtgaatctggaggagatg
ctcaatgacttctgggctcggctcctggaacgaatgtttcagctgatcaacccacagtat
cacttcagcgaggactacttggagtgcgtgagcaaatacacagaccagctgaagccattc
ggagatgttccccgaaagctgaaaattcaggtcactcgcgccttcattgctgctcggaca
tttgtccaggggctgaccgtgggcagagaagttgcaaatcgagtttccaaggtgagcccg
accccaggctgcatccgtgcgctcatgaagatgctgtactgcccttactgtcggggactc
cccacggtgagaccatgcaacaactactgcctcaatgtcatgaagggctgcctggcgaat
caggctgatctcgacaccgagtggaatctgtttatagatgcaatgctcttggtggcagag
cgactggaaggaccattcaacattgagtcggtcatggacccaatagacgtcaagatctct
gaagccatcatgaacatgcaagagaacagcatgcaggtgtctgcaaaggtctttcaggga
tgtggccaacccaaacccgctccagccctcagatctgctcgctcagctcccgaaaatttt
aatacacggttcaggccttacaatcctgaggaaagaccaaccactgctgcaggcacaagc
ttggaccggctggtcacagacataaaagagaaactgaagctctctaaaaaggtctggtca
gcattgccctacaccatctgcaaggacgagagtgtgacggcgggcacgtccaacgaagag
gaatgttggaacgggcacagcaaagccagatacttgcctgagatcatgaacgatgggctg
accaaccagatcaacaaccccgaggtggacgtggacatcacgcggcccgacacgttcatc
aggcagcagatcatggctctccgtgtgatgaccaacaaactgaagaacgcgtataacggc
aatgacgtcaacttccaggacacgagtgatgaatccagcggctcagggagtggcagtggg
tgcatggatgaggtatgtcctacggagtttgagtttgtcaccacagaggccccggcagtg
gatcctgacaggagagaagtagactcttctgcagcccagctgggacactcgctcctctca
ggatctctcgtctgcatcgccctggcgtggcagagactgtgcagataa
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