Orcinus orca (killer whale): 101273805
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Entry
101273805 CDS
T05247
Symbol
DDX50
Name
(RefSeq) ATP-dependent RNA helicase DDX50 isoform X1
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101273805 (DDX50)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101273805 (DDX50)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101273805 (DDX50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
101273805
NCBI-ProteinID:
XP_004280851
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All DBs
Position
14:27444827..27477388
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AA seq
738 aa
AA seq
DB search
MMPGKLLWGDIMELEAPLEETESQRRERQKSDRRKSRHHYDSDEKSETRENGVADDLDAP
KPKKTKMKEKLNGDTEEGYNRLSDEFSKSRKSRRKDLSNGDIDEYEKKSKRVSSLDSSTH
KSSENKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIA
QARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLS
VACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLG
FAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAA
TTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLH
GDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRT
GRAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLACVSY
AAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEIQ
DVSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWVLSVPA
KLPEIEEYYDGSTSSNSRQRSGWSSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRRSG
NRNRSRSGGRKRSFDWDS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgggaaactcctctggggggacattatggagctggaggcacctttggaggag
accgagagccagaggagggagaggcaaaagagtgatagaaggaagtcaaggcaccattat
gactcagatgagaaatcagaaacaagagaaaatggtgttgcagatgacctggatgctccc
aaacccaaaaaaactaaaatgaaagagaaactaaatggtgacactgaggaaggatataat
agactttcagatgaattttctaaatctcgtaagtcaagaagaaaagatctgtcaaatgga
gatattgatgaatatgaaaaaaaatcaaagcgagtgtcatccttagatagttctactcat
aaatcaagtgaaaataaactagaagagacactaacacgtgaacagaaagaaggagccttc
tccaatttccctatttctgaagagactataaagcttctgaaaggtcgaggggtaacatat
ctctttcctattcaagttaagacttttggtcctgtatatgaaggaaaagatttaattgct
caagcgcggacaggaacaggaaagacattctcttttgccatccccttgattgaaagactc
caaagaaatcaagagacaattaaaaaaagccgctcaccaaaggtacttgttttggctcct
acaagggaactggcaaaccaagtagccaaagacttcaaagatataactaggaaactcagt
gtggcgtgtttttatggtggaacatcatatcaaagccaaattaatcatattcgaaatggt
attgacatcttggttgggacccctggtcgtatcaaagatcatctgcagagcggccgatta
gatctttctaaactgcgccatgttgtgcttgatgaagtggatcaaatgttagatttaggt
tttgctgaacaagttgaagatattatccatgaatcctacaaaactgattctgaagacaat
cctcagactttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaa
tacatgaaatccagatatgaacaggttgaccttgttgggaaaatgactcaaaaggctgca
actactgtggaacatctggccatccagtgccactggtctcagaggccagcagttattgga
gatgtccttcaagtctacagtgggtctgaagggagggctattatcttctgtgagaccaaa
aagaatgtaactgaaatggccatgaatccacacataaaacagaatgcccagtgtttacat
ggcgatatcgcacagtcacaaagagaaattacactgaaaggcttcagagaaggtagtttt
aaagttttggtggcaaccaatgtggctgcccgtggtttggacattcctgaggttgacctg
gtgattcagagttcacctccacaggatgttgaatcctatattcatcgctctgggcgcaca
ggtagagctggccggacagggatttgcatatgtttttatcaaccaagagaaagaggtcaa
ttaagatatgtggaacaaaaagcaggaattacttttaaacgtgtaggtgttccttctaca
atggatttagttaaatctaaaagcatggatgccatcaggtctctggcttgcgtttcttat
gctgctgttgattttttccgaccatcagctcagagactgatagaagagaaaggggcagtg
gatgcattggctgcagcattagcccatatctctggcgcatcaagttttgaaccacgttct
ttgatcacctccgataaggggtttgtgaccatgactctggaaagcccagaagaaatacag
gatgttagctgtgcttggaaagaacttaacagaaagctgagtagtaatgctgtgtcccaa
attaccagaatgtgcctcctaaaaggaaatatgggtgtttgctttgatgttcccacaact
gagtcagaaaggttacaggcagagtggcatgattcagactgggtactctcagtgccagcc
aagttgcctgaaattgaagaatattatgatggaagcacatcttctaattccagacagagg
agtggctggtcaagtggccggtcgggccggtcaggtggtcgatctggtggccggtcaggt
agacagagtcgacaggggagtcggtcaggaagtcgacaagatggtagaagacgaagtggg
aacagaaatcggtcaagaagcgggggccgcaaacggagttttgactgggatagttaa
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