Orcinus orca (killer whale): 101274272
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Entry
101274272 CDS
T05247
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X3
KO
K11478
protein Jumonji
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03083
Polycomb repressive complex
oor04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101274272 (JARID2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101274272 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101274272 (JARID2)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
101274272 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
101274272 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
101274272
NCBI-ProteinID:
XP_012389828
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All DBs
Position
10:complement(94123343..94365906)
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AA seq
1433 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGIAGSLKAVN
GLLGNGQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEDVEEEDDETEDVKTATNNASSSCQSTPRKGKAHKHVHNGHVFNGSSRSSREKEPVQK
HKSKEATPAKEKHSDPRADGRREQASTSHPPAAPSAGSSARGLPAHHHPPLHRSAQDLRK
QVSKVGGVTRMSSLGTSAASAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETK
PNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGHTVNGLKVSGRLNPKSCTKE
GGGRQLREGLRNSKRRLEEAPPGDKPQSPPKKMKGEAGAAEGPGRKAAPAPAEKVPPGGH
GKKEVPERSLERNRPKRVSAGKGPPGRQAHGKPDGAPCENRSTSQSEPLPRPHEATAKAE
KGAGRAGWAAMDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPECKLND
EMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLIN
EMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV
LMEKESLERRKGPLEGHTEQDYNRFHPLPRFEPKNGLINGVAHRNGFRSKLKEVGPAQLK
TGRRRLFAQEKEVVKEEDDRGILSDFHKCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPA
EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILR
HLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVV
HTLLQANGTPGLQMLESNVMISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYS
VSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISAL
LDELRDTELRQRRQLFEAGLHSSARYGSHEGSSAAPDGKKKPRKWLQLETSERRCQICQH
LCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEVSASRGGSGPLPAWSMSQ
LVVTACSRPGSRCLLAGRCLTWWEGSSLRQGGGVGRSGSSSTGLEKPGAEAAGTSVLVRA
LSCPSEPVHSALSSAFPPGLGASIHKEFGFRAWLPHCLEGTVPSSPVGAQNRPRPKSAGP
SQGSPSLQAEGRFGGLAAASIWSLCPQSSPGLGLRSLPGPSPAGPGPLGHKVPIAVPVCP
CRRPSPAAASGSAVGLCVVNFRACGHLLSYGQRPRPCPYPGALADTEPFTVCS
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccgtggtcagaagaaagggtggtacgtaaagtcctttatttgtctctgaaggagttc
aagaatgcccagaagaggcagcatggtgaaggcattgctgggagcctgaaagcagtgaat
gggctccttggtaatggccagtctaagggattaggaccagcatcagaacagtcagagaat
gagaaggacgatgcatcccaagtgtcctcaactagcaacgatgttagttcttcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgctcaatcc
cagccgaatagtcccagcacaactccagtaaagatagtggagccattgctaccccctcca
gctactcaaatttctgacctctctaaaaggaagcctaagacagaagattttcttactttt
ctctgccttcgaggttctcctgcgctgcccaacagcatggtatatttcggaagctctcag
gacgaggaggacgtcgaggaggaagatgatgagacagaagacgtcaaaacagccaccaac
aatgcttcatcttcatgccagtcgacccccaggaaaggaaaagcccacaagcatgttcac
aatggacatgttttcaatggttccagcaggtcatcacgggagaaggaacctgttcagaaa
cacaaaagcaaagaggccactccggcgaaggagaagcacagtgatccccgggccgacggc
cggagggagcaggcttccacgagccaccccccagcggccccctccgcgggctcctctgcc
agggggctccccgctcaccaccacccccctctgcatcggtcggctcaggacttacggaaa
caggtttctaaggtcggcggagtcactcgaatgtcatctctgggtaccagtgcagccagt
gccaaaaagatgcgcgaagtcagaccttcaccgtccaaaactgtgaagtacactgcaacg
gtgacgaaggggactgtcacatacaccaaagccaagagggaactggtcaaggaaaccaaa
cctaatcaccacaagcccagttcagctgtcaaccacacaatctcagggaaaactgaaagt
agcaatgcaaaaacccgaaaacaggtgctatccctcgggggggcgtccaagtccaccggg
cacaccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgcactaaggag
ggcggggggcggcagctgagggagggtctgcggaactccaagcggaggctggaagaggcg
cccccgggcgacaagccgcagtcgccccccaagaagatgaagggggaggcgggtgctgcg
gagggtcccggcaggaaggcggccccggcccccgcggagaaggtgccgcctggcggccac
gggaagaaggaggtgcccgagcggagcctggagaggaaccggccgaagcgggtgtcggcc
ggcaagggcccgccgggcagacaagcacacggcaagccggacggcgccccctgtgaaaat
cgttctacctcgcaatcggagcccctgccccggccgcacgaggcgacggccaaggccgag
aagggggccggcagggccgggtgggcggccatggacgagatccccgtcttgcggccgtcg
gccaaggagttccacgacccgctcgtctacatcgagtcggtgcgccctcaggtggagaag
tacggcatgtgcagggtgatcccgcctccggactggcggcccgagtgcaagctcaacgac
gagatgcgcttcgtcacgcagatccagcacatccacaagctgggtcggcgctggggcccc
aacgtgcagcggctggcctgcatcaagaagcacctcagatctcagggcatcaccatggac
gagctcccactcataggaggctgtgagctcgacctggcctgctttttccggctgattaac
gagatgggcggcatgcagcaagtgactgacctcaaaaaatggaacaaactagcagacatg
ctgcgcatccccaaaaccgcccaggaccggctggccaagctgcaggaggcctactgccag
tacctgctctcctatgactccctgtcccccgaggagcaccggcgcctggagaaggaggtg
ctgatggagaaggagagcctggagaggcgcaaggggcccctggagggccacacggagcag
gactacaaccgcttccacccactgccccgcttcgagcccaagaacgggctcattaacggc
gtggcccacaggaacggcttccgcagcaagctgaaggaggtgggccccgcgcagctcaag
acggggcggcggcgactctttgctcaggaaaaggaggtggtgaaggaggaggacgacaga
ggcatcctcagcgacttccacaagtgcatatacaaggggaggtctgtttctttaacgact
ttttaccgaacagcaagaaatatcatgaacatgtgcttcagcaaggagcccgcaccagct
gaaatcgagcaagagtactggaggctcgtggaggagaaggactgccatgtggccgtgcac
tgcggcaaggtggacaccaacacccacggcagcggcttcccggtgggaaaatcagaaccg
ttttcaagacacggatggaacctcaccgtcctccccaataacacaggctccatcctgcgt
caccttggtgctgtgcctggagtgacaattccctggctaaatattggcatggtcttttct
acctcatgctggtctcgagaccaaaaccaccttccctacattgactacttacacactggt
gctgactgcatttggtattgcattcctgctgaggaggagaacaagctcgaggacgtggtg
cacaccctgctgcaagccaatggcacccccggcctgcagatgctcgagagcaacgtcatg
atctccccggaggtgctgtgcagggaggggatcaaggtgcacaggacggtgcagcagagc
ggccagtttgtcgtctgcttcccgggatcctttgtgtccaaagtgtgttgcggctacagc
gtctctgagaccgtgcacttcgccaccacccagtggacgagtatgggcttcgagacagcc
aaggagatgaagcgtcgccacatagctaagccattctccatggagaagttactctaccag
atcgcacaagcggaagcgaaaaaggaaaacggtcccactctcagtaccatctcagccctt
ttggacgagctcagggacacggagctgcggcagcggcggcagctgttcgaggccggcctc
cattcctccgcccgctacggcagccacgagggcagcagtgccgcgcccgacgggaagaaa
aagcctcggaagtggctgcagctggagacctcggagaggcggtgtcagatctgtcagcac
ctgtgctacctgtccatggtcgtgcaggagaacgagaatgtggtcttctgcctggagtgt
gccctgcgccacgtggagaagcagaagtcctgccgcggcctgaagctcatgtaccgctac
gacgaggtcagtgcctcgcggggtggcagtggtcccctgcccgcgtggtccatgtcacag
ctcgtcgtgaccgcgtgcagccggcctggttccaggtgccttctggccggacggtgcctg
acgtggtgggaaggtagctccttgcgccaaggtgggggagtgggcaggtccggctcgagt
tccactggcctggagaaaccaggagctgaggctgcagggacttctgtccttgtccgcgct
ttgtcgtgccccagcgagcctgtccacagtgcgctcagctctgctttccctcctggcctc
ggtgcctcgattcataaggagttcggtttcagggcgtggctgccccactgtctggagggg
actgtgccttcatctccagtcggggcccagaacagaccgagaccgaaatcggcagggcca
agccagggctccccttccctccaggccgagggccgcttcgggggccttgcggctgcgtcc
atctggtctctgtgtcctcagagcagcccgggactcggcctgaggagccttcctggcccc
agccccgcggggccggggcctctgggacacaaagtgccgatcgccgtgcccgtctgcccg
tgtcggcgtccctcccccgcagctgccagcggttctgctgtgggtctgtgcgtggtgaac
ttcagagcctgcggccacttgctgagctatgggcagcgcccacgcccttgtccttacccc
ggggccttggcagacacggagcctttcactgtttgctcctga
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