Orcinus orca (killer whale): 101275015
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Entry
101275015 CDS
T05247
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X3
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101275015 (CHD7)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101275015 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
101275015
NCBI-ProteinID:
XP_004275031
LinkDB
All DBs
Position
17:7662886..7841704
Genome browser
AA seq
3014 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLESLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSAN
QNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSNAPGNGLASPHSQYHTPPVPQVPHGAGGG
GGGGGGGSGGGGGGQMGVYPGLPNERHGGQSFVDGGSMWAPRAVQVPDQIRAPYQPPPPQ
PQAAPSGPPAQGHPPHLQQLGGYLARGDFSMQQHGQPQPRMGQFPPGQEGLGQGSPFIAG
PGHLSHVPPQSPGVAPSLRHAVQPFHHHPPAALHGEPVAHSPRFSPNPPPQGAVRPQTLT
FSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAV
GFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPP
QVRPGSAGIPMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQPSRPFMGMSPAPREL
AGHLRANGCPGVGLTDPQAIQDRLLPGQQHPGQPPAFQQLPSCPPLQPHPGLHHQASPPP
SHHQPWAQLHPSPQSAPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVNSDDYLLSVE
QQPQQKKKKKKNNHIVAEDPSKSFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRPKAKK
DPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALK
KKANKGKTEGSENSDLDKTPPSSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEE
ADDADAAGRDSPSTTSQSEPQESVDADGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYK
NFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFA
RSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLLSREPETERVERPPAD
DWKKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIY
LKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVI
KGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKLMDLEHKVL
LTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKC
CNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLI
FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLK
LGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQIL
LRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNL
VIDTPRVRKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDRSQGYARSECFRVEK
NLLVYGWGRWTDILSHGRYKRPLSEQDVETICRTILVYCLNHYRGDENIKSFIWDLITPT
ADGQTRALVNHSGLSAPVPRGRKGKKVKAQSSHPVVQDADWLAGCNPDALFQEDSYKKHL
KHHCNKVLLRVRMLYYLRQEVIGDQAEKILEGADSSEADVWIPEPFHAEVPTDWWDKEAD
KSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDRE
DEDPEYKPTRTPFKDEIDEFANSPPEDKEEPMEIRGPGKHSEGSAELGQLYWPNTSTLTT
RLRRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREE
ADFYRVVSTFGVIFDPAKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRVPAK
PDGEPPDLPSAIEPITEERASRTLYRIELLRKIREQVLRHPQLAERLRLCQPSLDLPEWW
ECGRHDRDLLVGAAKHGVSRTDYHILNDPELSFLDAHKTFAQTRGAAGAPALSALALGFG
QTPAAAATAAPTATPGQEEKAGGAEAKAGEAGEAEAEEEEAEGGGKDRKQDREAEAEPGA
GKSDPRGAEVGADMGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGTVSRGKNFDEESN
ASMSTARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWP
VNRRQVFDFQGLIPGYTPPTADSPLQKRSLAELSMVGQASISGSEDLTASPQLSKEDALN
LSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRGNQVVSENGQEKVVDLSKASREAAS
STSNFSSLTSKFILPNVSAPMSDAFKTQMELLQAGLSRTPARHLLNGSLVDGEPPMKRRR
GRRKNVEGLDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVIN
LEDGTRLVGEEAPKNKDLVEWLKLHPAYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNP
NKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSG
FVPESMFDRLLTGPVVRGEGASRRGRRPKSEIARAAAAAVASTSGINPLLVNSLFAGMDL
TSLQSLQNLQSLQLAGLMGFPPGLATATAAAAAAGGDTKNPAAVLPLVLPGVAGLPSMFG
LGGLLNTPLSAAAAAAAAAAAGNTAAAAGPAEPEDGACKAEEKGNENEDENKDSEKSTDA
VPGPDSANGSVGAATAPAGLPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPA
LAGLQNAVGSGDDKAPDKAEGGTFQEEETLEGSDAEESLDKTAESSVLEDEIAQGEELDS
LDGGDEIENNENDG
NT seq
9045 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtcttttcggcgaggacgggaatattttcagcgaaggc
ctcgaaagcctgggagaatgtggttaccctgaaaatcccgtgaatcccatgggtcaacag
atgccgatagaccaaggctttgcctccttacagccgtccctccaccatccctccgcgaat
cagaatcaaaccaagttgacccacttcgatcactataatcagtacgagcagcaaaagatg
catctgatggaccagccgaacagaatgatgagcaatgcccctgggaacggactggcgtct
ccccactcgcagtaccacaccccgcccgtcccccaggtcccccacggggctggcggcggt
ggtggcggcggcggcggtggcagcggcggcggcggcggcggccagatgggtgtctacccc
ggcctgccgaacgagcggcacggggggcagtctttcgtggacggcggctccatgtgggct
ccccgggccgtgcaggtgccggaccagatccgagccccctaccagccgccaccgccacag
ccccaggcggccccgtcggggccccccgcgcagggtcaccccccgcatctgcagcagctg
ggcggctacctggcgcgcggggacttctccatgcagcagcacgggcagccgcagccgagg
atgggccagtttcccccgggccaggagggcctcggtcagggaagccccttcatcgccggc
cccggccacctgtcgcacgtgcccccgcagagccccggggtggcgccgagcctgcgccac
gcggtgcagcccttccaccaccatccccccgccgctctccacggggagcccgtagcccac
agcccccggttctcccccaaccctcccccgcaaggggccgtgaggccgcagaccctcacc
tttagttctcggagccagaccgtcccctcacctactataaacaactcagggcagtattct
cgctatccttacagtaacctaaatcagggattagttaacaatacagggatgaatcagaat
ctaggccttacaaataatactccaatgaaccagtccgtcccaagataccccaacgctgta
ggattcccatcgaacagtggccaaggactcatgcaccagcagcctatccaccccagcggc
tcccttaaccaaatgaacacgcaaactatgcacccttcgcagcctcagggaacttacgcc
tctccgcctcccatgtcacccatgaaagcaatgagtaacccggcgggcacccctcctccg
caagtccggcccggaagtgccgggatcccgatggaagtcggcagttacccaaatatgcct
cacccgcagccgtctcaccagccccctggcgccatggggatcggacagaggaacatgggc
cccaggaacatgcaaccgtcccgtccgtttatgggcatgtccccggcgccgagggagctg
gccgggcacctgagagccaacggttgtcccggcgtcggcctcacagacccgcaggcgatc
caggaccggctgctccctggccagcagcaccccgggcagccgccggccttccagcagttg
ccaagctgccctccgctgcagccccatccgggcctgcaccaccaggcttcgcccccgccc
tcacaccaccagccttgggcacagctccacccctcgccccagagcgccccgcagaaagtg
cctgtgccgcagcattctccatcggagccctttctagagaaaccagtgccggatatgact
caggttagtggaccgaacgctcagctagtgaacagtgatgattacctgctgtccgtagaa
cagcagccgcagcagaagaagaagaaaaagaaaaacaaccacattgttgcagaggatccc
agtaaaagtttcggtaaagatgacttccctggtggggttgataaccaagaactaaacagg
aactcactggatgggtcccaagaagagaaaaagaaaaagaaaaggccgaaggcaaaaaaa
gatcccaaggaaccgaaagaacccaaggagaagaaagagcccaaggaacccaagaccccg
aaagcccctaagattcccaaagagccaaaggaaaagaaagcaaaaactgccacgccaaaa
cccaaatccagcaaaaagtcaagtaataagaaacctgattcagaagcaagtgctttgaag
aaaaaggccaacaagggaaaaacagaaggttctgagaattcagacttagacaaaacaccc
ccatcatctcctcctcctgaagaagacgaggacccaggtgttcagaagagacggtccagc
aggcaggtgaagagaaagcggtacaccgaggacttggagttcaagatctccgacgaggag
gccgatgacgcagacgctgctgggagagactcgccctccacaacctcgcagtcggagccg
caggaatctgttgatgcagacggtccagtggtagaaaaaattatgagtagtcgttcagta
aaaaaacagaaggaatctggagaagaggtagaagttgaggagttctacgtgaaatacaaa
aacttctcttatcttcattgtcaatgggcatctgtagaagatctggaaaaagataagaga
attcagcaaaagattaaacgatttaaggcaaagcagggccagaacaaattcctttcagag
attgaagatgagctttttaatccagattacgtggaggttgaccggataatggactttgca
cgtagcacagatgaccggggagagcctgtgactcactacctggtgaagtggtgctcactg
ccttatgaagacagcacgtgggagctgaggcaggacatagaccaagccaagatcgaagag
tttgagaagctgctgtcccgggagccggaaacagagcgcgtggagcgacctcctgctgat
gactggaagaaatcggagagttccagggagtataaaaacaataacaaactcagggaatac
cagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatttta
gcagatgaaatgggtttgggaaaaactatccagtccattacatttctctatgagatatat
ttgaaaggaatccatggcccttttttagtaattgccccattgtccacaatccccaactgg
gaaagggaattccggacctggacagagttgaacgtggttgtgtatcatgggagtcaagct
agtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtgata
aaggggtcctataagtttcatgccatcatcactacgtttgagatgattctgaccgattgt
cctgagctgcggaatattccctggcgctgcgtggtcattgatgaagcccacaggctgaag
aatcggaactgcaagctgttggagggactcaagctgatggacttggaacacaaagtgctg
ctgacagggaccccgctccagaacaccgtggaagagctcttcagcttgcttcacttcctg
gaaccaggtcgattcccttcggaaaccacctttatgcaagaattcggtgatctgaaaacc
gaagaacaggtgcaaaaactccaggctattctaaagccaatgatgttgagacgtctcaaa
gaggacgtggaaaagaacttggcccccaaggaagaaacgatcatcgaagtcgagctaaca
aacattcagaagaaatattaccgagccatccttgagaagaattttacgtttctttccaaa
ggtggtggtcaagctaacgtacccaaccttttaaacactatgatggaattacggaagtgc
tgcaatcatccctaccttattaacggtgctgaagagaagattttggaagagtttaaagaa
acacacaatgccgactctccagattttcagctccaggcgatgatccaggctgctgggaag
ctcgtgctgattgacaagctgctgccgaagctgaaggccggcggccacagggtgctcatc
ttctcccagatggtgcgctgcctggacatcctggaagactacctcattcagagacggtac
ccgtacgaaaggattgacggccgggtcagagggaacctccgccaggcagctatcgacagg
ttctccaaacctgactctgataggtttgttttcctcctgtgtacaagggcaggaggttta
ggcattaatcttactgctgctgatacctgcatcatctttgattccgactggaatccccaa
aatgatctccaggctcaggctagatgtcacagaataggacagagcaaatctgtgaaaatc
tacaggctgattacaaggaattcttacgagagggagatgttcgacaaagctagcttgaag
ctcggtctggataaagctgtcctgcagtccatgagcggaagagaaaacgctcccaacggg
gtacagcagctttccaagaaagaaatagaggatcttctccggaaaggggcctatggtgcc
ctcatggatgaggaggacgaagggtctaaattctgcgaagaagatatcgaccagattctc
ctccggcgaacccacaccatcaccatcgagtctgagggaaagggttccacgtttgctaag
gccagttttgttgcatctggaaacaggacagatatttccttggatgatccaaatttctgg
caaaagtgggctaagaaggcggaattggatatcgatgccttaaatgggaggaacaacctg
gttattgacactccaagagtgaggaagcaaaccaggctgtacagtgcagtgaaggaggat
gagctgatggaattttcagacctggagagcgattctgaagagaagcccagcacgaagcca
cggcggccgcaggacaggtcccagggctatgccaggagcgagtgcttccgagtagagaag
aacctgcttgtctatggctgggggcgctggacagacatcctttcccatggccgctacaag
cgtccgctcagcgagcaggacgtggaaaccatctgcaggactatcctcgtgtactgcctc
aaccactaccggggggacgagaacatcaagagcttcatctgggatctgatcacgcccacg
gccgatggccagacgcgagccctggtcaaccattccggtttatcagccccggtgcccagg
gggcggaagggcaaaaaggtgaaagcccagagctcacatccagtggtgcaggacgctgac
tggctggccggctgcaacccagatgccctgttccaggaggacagctacaagaagcacctg
aagcaccactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctgagacaagaa
gtgataggagaccaggcggagaagatcctagagggcgccgactcaagtgaagctgatgtg
tggatacctgagcctttccacgcggaagtccccacagattggtgggataaggaagctgat
aagtccctcctgattggagtgttcaagcacgggtacgagaagtacaattccatgcgagct
gaccccgcgctgtgcttcctggaacgagttggtatgcccgatgccaaggccattgctgcc
gagcagagaggaacagacatgctagcagatggcggtgatgggggagaatttgatagagaa
gatgaagacccagaatataaaccaaccagaacgccgttcaaggatgaaatagatgaattt
gcaaattctcctccagaagataaggaagaacccatggaaatacgcggcccaggcaagcac
agcgagggcagcgctgagttaggccagctgtactggcccaatacctcgaccctgaccacc
cgtctgcgcaggctcattactgcctatcagcgcagctataaaaggcagcagatgaggcag
gaggccctgatgaagaccgaccggcggagacggcggccccgggaggaagtgcgggccctg
gaagctgaaagggaggctataatatcggagaaacggcagaagtggacgagacgggaagag
gcggacttttaccgcgtggtgtccacgtttggggttatttttgacccggcgaaacagcag
ttcgactggaaccaattccgagcctttgccaggcttgacaagaagtccgatgagagtctg
gagaagtacttcagctgcttcgtggccatgtgccggcgggtgtgtcgcgtgcccgccaag
ccagatggcgagccgcccgacctgccctcggcgatcgagcccatcacggaggagcgcgcc
tcgcgcaccctgtaccgcatcgagctgctgcggaagatccgcgagcaggtgctgcgccac
ccgcagctggccgagcggctccggctctgccagcccagcctggacctgcccgagtggtgg
gagtgcggcaggcacgaccgggacctgctggtgggcgccgccaagcacggggtcagccgc
acggactaccacatcctcaacgaccccgagctctccttcctggacgcgcacaaaaccttc
gcccagacccgaggggcggccggcgccccggccctgagcgcgctggcactgggctttggc
cagacgcccgccgccgccgccaccgccgcccccaccgccaccccgggccaggaggagaag
gcgggaggggcggaggccaaggccggggaggcgggggaggccgaggcagaggaggaggag
gccgagggcggcgggaaggaccggaagcaggaccgcgaggccgaggccgaacccggcgct
gggaagagcgatccgagaggggcggaggtcggtgcggacatggggcccaagtccatttca
gaaaagggttccgaggaggacgaagaggaaaagctggaggacgatgacaagtcggaagag
tcttcccagcccgaagcaggaactgtctcgagagggaagaattttgatgaagagagcaat
gcttccatgagcactgctagggatgagacccgagacggattctacatggaggatggagat
ccgtccgtagctcagctccttcatgaaagaacgtttgccttctcgttttggcctaaggat
cgagtaatgataaaccgattagacaacatctgtgaagcagtgttgaaaggcaaatggccg
gtaaataggcgccaggtgtttgatttccagggcctcatccccggctacacgccccccact
gccgacagtcccctgcagaagaggagcctggccgagctctccatggtgggccaggcgagc
atcagcggcagcgaggacctcaccgcttcccctcagttgtccaaggaagacgccctcaac
ctctccgtccctcgccagaggaggagaaggaggaggaagatcgaaatcgaggccgaaaga
gctgctaagcggcgaaacctcatggagatggttgcccagctgcgggggaatcaggtggtc
tcggaaaacggacaggagaaagttgtcgatttatcaaaggcctcgagagaggcggcaagc
tctacctcaaatttttcatctcttacttcaaagtttatcttgcctaacgtctcggcgccc
atgtctgatgcctttaagactcaaatggagctgctccaggcaggcctgtcccgcacgccc
gccaggcatctgctcaacggctccctcgtggacggagagcctcccatgaagaggaggcgg
ggaaggaggaaaaacgtggagggcctcgacctgctgttcatgagccacaaacggacgtca
ttgagtgcagaggatgctgaggtgaccaaagcttttgaagaagatatagagaccccacct
acaagaaacattccttctcctggacagctggacccagacacgcggatccctgttataaat
ctcgaagatgggactaggctggtgggggaagaagctcctaaaaataaggacttagtcgag
tggctgaagctgcatcccgcttacactgttgatatgccaagttacgtaccaaagaatgca
gatgtgctgttttcctcatttcagaaaccgaaacagaaacgacacagatgtcgaaaccct
aataaattggatataaacactttgacaggagaagaaagggtgcctgttgtcaataaacga
aatgggaagaagatgggtggagctatggcgcctcccatgaaggatctaccccggtggctg
gaagaaaaccccgagtttgcagttgccccagactggaccgatatagtcaagcagtctggt
ttcgttcctgagtcgatgtttgaccgtcttctcaccggacccgtggtgcggggagaaggg
gcgagccggcggggacggaggcccaaaagtgaaatcgcccgcgccgccgccgccgccgtg
gcctccacgtcgggcatcaaccccctgctggtgaacagcctgttcgctgggatggacctg
acgagcctgcagagcctccagaacctccagtctctgcagctggccggcctcatgggcttc
cctccgggcctggccacggccacagccgctgccgccgccgccggaggagacaccaagaac
ccggccgccgtgctgcccctggtgctgccgggcgtggccggcctgcccagcatgttcggg
ctgggcgggctgctcaacaccccgctgtccgccgccgccgccgccgccgccgctgccgcc
gccggcaacaccgcggccgccgccggccccgcggagccggaagacggcgcgtgcaaagcg
gaggagaagggcaacgagaacgaggacgagaacaaggactcggagaaaagcacagacgcc
gttccgggcccggactctgcgaatggatctgttggtgctgctactgccccggccggcctg
ccctccaacccgctcgccttcaaccctttcctcctgtccaccatggccccgggcctcttc
tacccgtccatgtttctacctccgggactgggaggattgacgctgccgggcttccccgcc
ttggcgggactgcagaacgccgtgggctccggcgacgacaaggctcccgacaaggctgag
gggggcacctttcaggaagaggagaccctcgagggcagcgacgccgaggagagcctggac
aagacggcggagtcctcagtcttagaagacgagatagcacagggcgaagagctagactca
ctcgacgggggggacgaaatagaaaacaatgaaaatgatggataa
DBGET
integrated database retrieval system
