Orcinus orca (killer whale): 101275020
Help
Entry
101275020 CDS
T05247
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101275020 (DENND4C)
Membrane trafficking [BR:
oor04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101275020 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
101275020
NCBI-ProteinID:
XP_033295610
LinkDB
All DBs
Position
6:complement(52544613..52674823)
Genome browser
AA seq
1956 aa
AA seq
DB search
MIEDKGPRVTDYFVVAGLIDTSTLLDQEINRLDTKSTGPKAPITDIAVINKSAGETVPEG
YTCVEATPSALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYDGKERLIPGCEVIQA
TPYGRCANVNNSSTTSQRIFITYRRAPLIRPQNSLAVTDICVIVTSKGETPPHTFCKVDK
NLNCGMWGSSVFLCYKKSVPASNAIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGATI
ECWDPQSKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSRELLTEKQLMQLGLLTPVERK
MVSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMQNIPFPSP
QRPRILVQLSVHDALIFSQPVSTPLPLSGANFSTLLMNLGPETCATLLLFVLLESKILLH
SLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAAVLSAPLPFIVGVDSRYFDLHDPP
QDVVCIDLDTNMLYISDEKKNMNWKQLPKKPCKNLISTLKKLYPQLSSVHRKTQEGSAIE
MTPIEADFSWQKKMTQLEMEIQEAFLRFMASILKGYRTYLRPITEAPSNKATAADSLFDR
QGFLKSRDRAYTKFYTLLTKTQIFIRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGTEKT
DKVDFDSAEDTKLIELDDSQKSEHTVFIMPPEPPPDDGKDLSPKYSYKYFPRLDLKLFDR
PQELKLCFSRHPTGSSITNSPALMAKRTKQEIKTAQKLAKRCYTNPPQWAKCLFSHCYSL
WFICLPAYVRVSHPKVRALQQAYDVLIKMRKTDVDPLDEVCYRVVMQLCGLWGHPVLAVR
VLFEMKTAKIKPNAITYGYYNKVVLESPWPSSTRSGIFLWMKVRNVVRGLAQFRQPLKNT
VQKSQVSSISAPQNATGGSDGDTVSHGSVDSSNDANSGEHTVFVRDLISLDSTDNHSSTG
GQSDQGYGSKDELIKDDAEIHVPEEQVSGDLITKTKVETEEVCDVSAVVAKHSQPSAEPP
SPPEPPAWGGSIVKIPSGIFDVNGRKSSTGSTPNVLFSTQDPVEDAVFGEVTNLKKNGDR
GEKRQKHFPERSCSFSSESRAGMLLKKSSLDLISSEVAIMMGADARILTAALTSPKTSPL
HIARTHSFESISCHPADTRTRVSESTWDSEHRSSSVLEMLEESQEFIEPVVDENVAKTPV
TKDTCDSLQNDSNQSRDLKAGSKDLLNKRSSSCGGAKAIEREDVETGLDPLSLLATECIG
EKTPDSEDKLFSPVIARNLADEIESYMNLKSPLGSKSSSMELHGEGNREPGTTSAFIHPL
ERRSSLPLDHGPAAQDSPESEKSSPAVSRSKTFTGRFRQQTPSRGHKERSASLSALVRSS
PHGSLGSVVNSLSGLKLDNILSGPKMDVLKSGMKQAATVASKMWVAVSSAYSYSDDEEET
KRDYSFPAGLEDHILGENISPNTSISGLVPSELTQSNTSLGSSSSSGDVGKLHYSPGEIP
FPRGIKGQDFEKSDHGSSQNTSMSSIYQNCTMEVLMSSCSQCRACGALVYDEEIMAGWTA
DDSNLNTTCPFCKSNFLPLLNIEFKDLRGSASFFLKPSTSGDSLQSGSITLASEPLEHKP
ISSSAEPDLINFMDFPKHNQTITEETSSAVESSDEIMKASGDVQTMKISSVPNSLSKRNV
SLTRSHSVGGPLQNMDFSQRPFHGISTVSLPNSLQEIVDPLGKRPNPPPVSVPYLSPLVL
RKELESLLENEGDQVIHTSSFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNGGVQ
LPLSSLSQDSKLVYIQLLWDNINLHQEPGEPLYVSWRNFNSEKKLSLLSEEQQATSALVE
TIRQSIQHNDVLKPINLLSQQMKGDMKRQRSLYREILFLSLVSLGRENIDIEAFDNEYGL
AYNSLSTEILEKLQKIDAPPSISVEWCRKCFGAPLI
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaagggccaagagtgactgactactttgttgtggcaggtctcattgat
acatctactcttttggatcaagaaataaatcgtttagatactaagtctactggacctaaa
gctccaattacagatattgcagttattaacaaatcagctggggaaacagtacctgagggt
tacacctgtgttgaagccactccgtcagctctgcaggcaaacttgaactacggaagtctg
aaaagcccagaactgttcctctgttataaaagagggagagataaaccaccccttactgac
attggagttttatatgatgggaaagaaagactaattccaggatgtgaagtgatccaagcc
acaccctatggtcgctgtgccaatgtcaacaatagttcaactacttcacaaagaatcttt
atcacttatcgaagggctcctctaattcgaccccagaattcgttggctgtaactgatatc
tgtgttatcgtaaccagtaagggagaaacccctcctcataccttctgcaaagttgacaaa
aacttaaactgcggaatgtggggttccagtgtgtttctgtgttataagaagtctgtgcct
gcttctaatgcaatagcatataaagctggtttaatttttaggtatccagaagaggactat
gagtcatttccgctatcggaatctgtccctctcttctgccttccgatgggagctacgatt
gaatgttgggatccccaaagcaaatacccgcttccagttttttcaacttttgtcctcaca
ggctcttctgctgaaaaggtatatggagctgccatccagttttatgaaccttactctcga
gaacttctaacagagaaacagcttatgcagctgggcctgttgacacctgtggagagaaaa
atggtctccaaatccatcaattcaaacaaatgcatttgtttactctcacactggcctttt
tttgaagcttttagaaaatttctcatgtttatctacaaactttctgtgtctggaccacat
cctcttcccattgaaaagcacatttcacactttatgcaaaacatcccttttccttcacca
caaagaccaagaatcctggtacagctatcagtccatgatgcgttaatattttcacaacca
gtttctacacctttaccactaagtggagccaactttagcaccttgttaatgaatctgggt
cctgagacttgtgcaacactgctgctctttgttttacttgagagcaagattttgctgcat
tctcttaggccagctgtgttgactggagtagctgaagctgttgtagctatgatctttcca
tttcagtggcaatgcccatatattcccctttgtcctctttcactggcagccgtgcttagt
gcacctttaccatttatagttggagttgactcaaggtattttgatcttcatgacccacca
caagatgttgtttgcattgacttggatacaaacatgttatatatatcagatgaaaagaag
aacatgaactggaagcagcttcccaaaaagccatgcaaaaatctgattagcaccttgaag
aaattgtatccccagctatcttcggttcaccgaaaaactcaggaaggttcagcgattgag
atgactccaattgaagcagatttctcctggcaaaagaagatgacacaacttgagatggaa
attcaggaggcatttttgcgctttatggcatccattttaaaaggatacagaacatatctc
agaccaatcacagaggctccttcaaataaagccacagctgctgattcattgtttgaccga
cagggatttttaaaaagtcgagatcgtgcctatacaaaattctacacccttttaaccaaa
acacagatttttattcgtttcattgaagaatgtagttttgtaagtgataaagatactgga
ttggctttttttgatgactgcatagaaaagttgtttcctgataaaggcacagagaaaaca
gataaggttgattttgattcagcagaagacaccaaattgatagagctagatgactcacag
aaaagtgagcatactgtgttcataatgccacccgagccaccgcctgatgatggaaaggat
ctgtcaccaaagtacagttacaaatactttccaagactggaccttaagctttttgacaga
ccacaggagttgaaactttgttttagtagacaccctactgggagtagcattacaaacagt
ccagctctcatggctaagagaactaaacaggagataaaaacagctcaaaagttggcgaag
agatgttatacaaatccaccacaatgggccaagtgtctcttcagtcactgttacagttta
tggtttatttgtctcccagcctatgttagagtttctcatcctaaggtcagagcacttcag
caggcatatgatgtacttattaagatgaggaaaacagatgtggatcctctagatgaggtg
tgctatcgagtagtaatgcagctttgtggactttggggtcatcctgtcttagcagtgaga
gttttatttgaaatgaaaactgctaaaataaagccaaatgctattacttacggctattat
aataaggtagttttggagagcccgtggcctagcagtacccgcagtggtatcttcttatgg
atgaaggtacggaatgtggtacgtggcttggcacaatttaggcagccacttaaaaatacc
gtgcaaaagtcacaggtctcctcaatatcagctcctcaaaatgccacaggtggaagtgat
ggggacacggtgagccacggtagtgtggatagttctaatgatgctaacagtggggagcac
acagtcttcgtcagagatttaatcagtcttgattccactgataatcactctagcacaggt
ggtcagtctgaccaaggctatgggtctaaggatgaacttataaaggatgatgcagaaatt
catgtgcctgaagaacaagtatcaggagacttgataaccaaaacaaaagtggaaacagaa
gaggtatgcgatgtctctgctgttgtggccaaacattcacaacctagtgcagagcccccg
agtcctcctgagcctcctgcatggggcggcagtattgtgaaaattccatctggtatattt
gatgtcaatggcaggaaaagtagcactggcagtacaccaaatgtactgttttctactcaa
gatccagttgaagatgcagtctttggcgaagttactaatctcaagaagaatggtgataga
ggagaaaaaaggcaaaagcattttccggagagaagctgtagttttagttctgaaagtcga
gcaggaatgttgcttaagaagagcagtttggatttaatttcaagtgaagtggctatcatg
atgggagcagatgccaggattctcacagcagcactgacgagtcctaagacttctccactt
catatcgcaagaacccatagctttgagagtattagctgtcatccagctgacactaggact
cgtgtgtctgaaagcacttgggattctgagcacagatcttcatcggtgttagagatgctt
gaggaaagccaagagttcatagaacctgtggttgatgaaaatgtagctaaaactcctgtg
acaaaggatacatgtgacagcctacaaaatgacagtaatcagtccagagacttgaaagca
ggatccaaggatctattaaataagagaagtagttcatgtggtggtgctaaagctattgag
agggaagatgttgaaactggactagatcctttgtcacttttagccactgaatgtatagga
gaaaaaactcctgattcagaagataagttgttttctccagttattgcacgtaatctggct
gatgaaattgaaagctatatgaatctaaagagtcccttgggtagcaagtcttctagtatg
gaactacatggagagggaaacagagagcctggcactaccagtgcatttattcacccttta
gagaggagatcaagcctacctttagatcatggtcctgcagcacaggacagtcctgaaagt
gaaaagagctcccctgcagtgtccagatctaaaacttttactgggcgtttcaggcaacaa
actccctctcgaggtcataaagaacgttcagcttctttatcagcactggtccgttcttca
ccacatggctcattgggttctgtggtaaattctttgtcagggctaaagctggacaatata
ctctcagggcccaagatggatgtgctaaaatctggtatgaaacaagcagctacagtagcc
agtaagatgtgggtagctgtatcatctgcctacagctattcagatgatgaggaggaaaca
aagagagattacagcttcccagctggccttgaagaccatattttaggagagaatatatca
cctaacacgagtatctcagggctggtccctagtgaacttacccagagcaacacaagcctt
ggcagtagcagcagcagtggagatgtaggtaaactgcattactcaccaggtgaaattcca
tttccaagaggcataaaagggcaggactttgaaaagtcagatcatggttcttctcaaaac
accagcatgtccagcatctatcagaattgtacaatggaggttttgatgtcaagttgttca
cagtgcagagcttgtggagctttagtttatgatgaagaaattatggctggatggacggca
gatgattcaaacttgaatacaacctgtcccttctgtaaaagcaacttcttgcctcttctc
aacatagaatttaaggacttgagaggctctgcaagctttttcctgaaaccaagtacctct
ggtgacagtttacaaagtggaagcattacactggcaagtgaacctttggaacacaaaccc
atatccagttcagcagaacctgacctgatcaactttatggatttcccaaaacataaccag
accataactgaagaaacaagctctgcagttgaatcaagtgatgaaataatgaaagccagt
ggagatgtccaaactatgaaaatttcatctgtgcctaatagtttatcaaaacgaaatgta
tctttgactagaagtcacagtgttggaggtcccttgcaaaatatggacttttcccagaga
ccgtttcatggcatttcaacagttagtcttccaaacagtctgcaggaaattgtggatcct
ttaggaaaaagacccaatcctccccctgtttctgtgccctacttgagtcctctagtgctt
cgtaaagaacttgaatctttgctagaaaatgaaggcgatcaggtgattcacacgtcctct
ttcatcaatcaacatccaatcattttctggaacctcgtttggtatttcagacgtttggac
cttcctagtaacttaccaggacttatcctcacatctgaacattgtaacggaggtgtacag
cttcccctgtcatctctgtcccaggatagcaaactcgtgtatattcagctgttatgggat
aatatcaaccttcatcaggaaccaggagaacctctgtatgtctcatggaggaattttaat
tctgaaaagaaattgtctctcctgtcagaggaacaacaagcaacaagcgctttagtagaa
accatcaggcagagtattcaacataatgatgttcttaaacccatcaacctgctttcacaa
caaatgaagggagacatgaagagacaaaggagtttatacagagaaatcctcttcttatca
ttagtgtctcttggaagagagaatattgatattgaggcttttgacaatgagtatggactt
gcatacaatagtttatctacagagattcttgaaaagttgcagaaaattgatgctccacca
agtatcagtgtggagtggtgcaggaagtgttttggagcacctctcatttaa
DBGET
integrated database retrieval system
