Orcinus orca (killer whale): 101275172
Help
Entry
101275172 CDS
T05247
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101275172 (DHX34)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101275172 (DHX34)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101275172 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ResIII
AAA_19
ATPase_2
TsaE
ATPase
Motif
Other DBs
NCBI-GeneID:
101275172
NCBI-ProteinID:
XP_004271164
LinkDB
All DBs
Position
20:50721902..50753945
Genome browser
AA seq
1145 aa
AA seq
DB search
MPPPRTREGRGPRDRPPAPSQEEGPEKWDWNCPETRRLFEDAFFGDEDYIRQGSEECQKF
WTFFERLQRFQNLKTTRKDEKDSRHPKHSIPALADLPCAYDPRYRINLSVLGPDTRRSRG
LGRRLAPERVSEFRQALLHYLDFGQKQAFGRLAKLQRERMALPIAQYGDRILQTLKEHQV
VVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQI
RFESTRSAATKIVFLTVGLLLRQIQREPRLPQYQVLIVDEVHERHLHNDFLLGILRRLLP
QRPDLKVILMSATINISLFSSCFGSAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPR
PFLRVLEAIDNKYPPEERGDLLVFLSGMAEISAVLEAAQTYASHTQRWAVLPLHSALSVA
DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI
SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKGMSVGDP
RTFPFIEPPPPTSLETAIRYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFH
LAEPVLTIAAALSVQSPFTRGAQSNPECVAARRPLESDQGDPFTLFNVFNTWVQVKSERS
RNSRRWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLARAQASKPGDSYSRLRQRRERQA
LYQLKRQHEQGQGRRRKVLRLQEDQDGCSSDEDRGGAASQGGGDNVDIQDVKFKLRHNLE
QLQAAASSAQALTRDQMALLKLVLGRGLYPQLAIPDPFNSGRKDSDQIFHTETKQGAVLH
PTCIFANSPEVLHTQEQEARGSDGSRDDKDKMSSRHQLLTFVSLLETNKPYLVNCVRIPA
LQSLLLFSRSLDTSGDCCRLVADGWLELQLVDSESAVRLLAASLRLRAHWESALDRQLAH
QARWRLEDKDDEETDPVNRKEVAALSRELLQFTASKVSYSLRRLTGLEIQNLYVGPQTIT
AAPSLPGLFGCSTPSPHPTKGGYAVTDFLTYSCLTSDADLYSDCLRTFWTCPHCDLHMPF
TPLERIAHESTCPEAPQDGPPGAEEAAPEPLQKASALQRPYHCEACQKDFLFTPTEVLRH
RRQHV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcccagaacaagggagggcaggggtccccgagaccgacccccggctcccagt
caggaagagggcccggagaaatgggactggaattgtccagagacacgtcgcctcttcgag
gacgccttcttcggtgatgaggattatatccggcagggttctgaggagtgccagaagttc
tggaccttctttgaacgcttgcagagattccagaatctcaagaccaccaggaaggacgag
aaagactctaggcatcccaagcacagcatcccggcactggccgacctaccttgcgcttat
gacccacgctaccgcatcaacctctccgtccttggccccgacactcggcgctctcggggg
ctaggcaggcgcctggccccggagagagtgtctgagttccgccaagccctgctgcactac
ctggactttggccagaagcaggcgtttgggcggctggccaaactgcagcgtgagcgcatg
gcactgcctatcgcccagtatggggatcgcatcctgcagacgctgaaggagcaccaggtg
gtggtggtggcaggtgacacgggctgcggcaagtccactcaggtgccccagtacctgctg
gccgctggcttcagccacgtggcatgcacccagccccggcgaatcgcctgcatctcactg
gcgaagcgggtcggctttgagagcctcagtcagtatggctcacaggtcggctaccagatc
cgttttgagagcacacgctcggcggccaccaagattgtgttcctgacagtggggctgctc
ctgaggcaaatccagcgggagccccgcctgccgcagtaccaggtcctgatcgtggatgag
gtccacgagcggcacctccacaacgacttcctcctgggtatcctccggcgcctgctgccc
cagcgacctgacctcaaggtcatcctcatgtcagccaccatcaacatctcgctcttttcc
agctgcttcggcagtgcccccgtggtacaggtgcccgggaggctcttccccatcacggtt
gtgtaccagccgcaggaggccgagcctacaacatccaagtcggagaagctggacccgcgg
cccttcctcagggtgctggaggccattgacaataagtacccacctgaggagcggggtgac
ctcttggtcttcctcagtggcatggcggagatcagcgccgtgctcgaggcagcccagacc
tacgccagccacacccagcgctgggcggtgctgccgctgcacagtgccctctctgtggcc
gaccaggacaaggtgttcgacgtggccccacctggagtccggaagtgcatcctctccacc
aacatcgctgaaacctcagtcaccattgatgggatccgctttgtcgtagattctgggaag
gtgaaggagatgagctatgacccgcaggccaaactgcagcggctgcaggagttctggatc
agtcaggccagtgctgagcagcgtaagggccgggcgggccgcacgggccctggtgtctgc
ttccgcctctatgccgaatcggactacgatgccttcgccccctaccctgtcccggagatt
cggagggtcgccctggatgcactggtgctgcagatgaagggcatgagtgtgggggacccc
cgaacctttcccttcatcgagccacccccaccaaccagcttggaaacggccatccgctac
ctccgggaccagggggccctggacagctcagaggccctcacccccattgggtccctgctg
gcccagctgcctgtggacgtcgtgattgggaagatgctgatcctgggctccatgttccac
ctggcggagcctgtgctcaccatcgccgctgccctcagcgtccagtcgcccttcacccgc
ggcgcccagagcaaccccgagtgtgtggcggcgcggcgacccctggagagtgaccagggg
gaccccttcacgctcttcaacgtcttcaacacctgggtgcaggtgaaatctgaacggagc
agaaactctcgcaggtggtgccgccaccggggcatagaggagcatcggctgtatgagatg
gccaacctgcggcgccagttcaaggagctgttggaagaccacgggctgctggccagggcc
caggcctcgaagccgggggacagctacagtcggctacggcagcgtcgggagcgccaggcg
ctctaccagctgaagcgccagcatgagcagggccagggacgcaggcgcaaggtgctgcgg
ctccaggaggaccaggacggctgctccagcgatgaggaccggggcggcgcagcctcgcag
gggggcggtgacaacgtggacatccaggatgtgaagttcaagctccggcacaacctggaa
cagctgcaggcggccgccagctcagcccaggccctgactcgggaccagatggccctgctc
aagctggtgctgggccggggcctctacccacagcttgccatcccggacccgttcaacagt
ggccgcaaggactcggaccagatcttccacaccgagaccaagcagggcgccgtgctgcac
cccacctgcatcttcgccaacagccctgaggtgctgcacacacaggaacaggaggccagg
ggcagcgatgggagccgagatgacaaggacaagatgagcagcaggcaccagctcctcacc
ttcgtctccctgctggagaccaacaaaccgtacctggtgaactgtgtccgcatccccgct
ctgcagtccctcctgctgttcagccggtccctggacaccagtggtgactgttgccgtctg
gtggccgatggctggctggagctccagctggtggacagtgagagcgctgtccggctcctg
gcggcttccctgcggctccgggcccactgggaaagcgccctggaccggcagctggcccac
caggcccggtggcggctggaggacaaagacgacgaggagacagacccagtcaaccgcaag
gaggtggcagccctgagcagggagctgctgcagttcacggcgtccaaggtttcctacagc
ctccggcggctcacagggctggaaatccagaacctctatgtgggaccccagaccatcact
gctgcccccagcctccctggcctctttggctgctctaccccgtccccccatcccaccaaa
gggggctacgcagtcactgacttcctcacctacagctgcctcacgagtgacgcggacctg
tacagcgactgtctccgcaccttctggacctgcccccactgcgacctgcacatgcccttc
acgcccttggagcgcatcgcccacgagagcacctgccccgaggccccacaggacggtccc
ccaggggctgaggaggctgcccccgagcccctccagaaggcatccgccctgcagaggccc
taccactgcgaggcctgccagaaggactttctgttcacacccacggaggtgctgcggcac
aggaggcagcatgtgtga
DBGET
integrated database retrieval system
