Orcinus orca (killer whale): 101275395
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Entry
101275395 CDS
T05247
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X4
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04140
Autophagy - animal
oor04148
Efferocytosis
oor05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101275395 (VPS41)
04148 Efferocytosis
101275395 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101275395 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101275395 (VPS41)
Membrane trafficking [BR:
oor04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
101275395 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
zf_RING_Vps8_fungal
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_EML_2
Vps39_1
zf_RING_Vps8
Beta-prop_RIG_2nd
Frtz
zf-RING_5
RIG-I_C
Beta-prop_IFT140_2nd
zf-rbx1
CofB_pilin_dom
zf-RING_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101275395
NCBI-ProteinID:
XP_004263379
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Position
9:complement(91497039..91689753)
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AA seq
854 aa
AA seq
DB search
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHEKFLAL
GTHYGKVYLLDVQGNITQKFDISPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDSVTLIIGWGPSVKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVEKGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIDFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMTSMNSPVQFCNICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcggaggagcaggaaacggggtctcttgaagaatctacagatgagtctgag
gaagaagagagtgaagaggagcccaaactgaagtatgaaaggctctccaatggggtaact
gaaatccttcagaaggatgccgctagctgcatgacagtccacgaaaagttcttggcgctg
ggcacacattatggcaaggtttatttactggatgtccaggggaacatcactcagaagttt
gatataagtcctgtgaagataaatcagattagcctggatgaaagtggcgaacacatgggc
gtgtgttcagaggatggcaaggtgcaggtgtttggactatattctggagaagaatttcat
gagacttttgactgtcccattaaaatcatcgccgtgcatccgcatttcgtgagatccagc
tgcaagcagtttgtgaccggagggaagaagttgctgctgtttgaacggtcctggatgagc
agatggaagtcttcagttctgcacgaaggagaagggaacatacggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggtgtgaagatttttgacatcacctcaaag
caaagaatcaccaatgtgccccgggatgatataagtcttcgccccgatatgtatccctgt
agcctctgctggaaggacagtgtgacactgatcattggctggggcccctctgtcaagata
tgctcggtgaaggaacggcatgccagtgaaatgagggacttgccgagccgatacgttgaa
atagtgtctcagtttgaaactgaattctacatcagcggactcgcacctctctgtgaccag
cttgttgtactttcctatgtaaaggaggtttccgaaaaaacggaaagagaatactgcgcc
agacccagactggatatcatccagccgctttccgagacttgtgaagagatctcttctgat
gctctgactgtgagaggctttcaggaaaatgaatgtagagattatcacttagaatactcg
gaaggggagtcactcttctacattgtgagtccaagagatgttgtcgtagccaaggaacga
gaccaagatgaccacatcgactggctccttgaaaagaagaaatatgaagaagctctgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggca
tatataaaccacctggtggagaaaggagagtacgacatagcggcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtttataaatttaaagaaatcgga
cagcttaaggctattagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttgcatgaatttttggaaagtgattatgagggttttgccacactgatc
cgagaatggccgggagatctgtacaacaattcagtaatagttcaagcagttcgggatcat
ctgaagaaagacagtcagaacagaaccttacttaaaaccctggcagaattgtacacctat
gacaaaaactatggcaatgctctggaaatatacttaacgttaagacataaggatgtcttc
cagttgatccacaagcataaccttttcagttctatcaaggataaaattgttttattaatg
gattttgattccgagaaagctgttgacatgcttttggacaatgaagataaaatttcaatt
aaaaaggtagtggaagaattagaagacagaccagagttgcagcacgtgtatctgcataag
cttttcaaaagagaccatcataaggggcagcgctaccacgagaagcagatcagcctttac
gctgaattcgaccgacccaacttgcttccatttctccgagacagtatccattgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttctg
agccgaatgggtaacagccgaagtgccctgaagatgatcatggaggaattacatgatgtt
gataaagcgattgactttgccaaggaacaggatgacggggaactctgggaagatctgatt
ttatattccatcgacaaaccaccctttatcaccggcttgttaaacaacatcggcacgcat
gttgacccaattctactgattcaccgtattaaggaaggaatggagattcccaatttgaga
gactccttggttaaaattctgcaagactacaatctgcaaattctgcttcgcgaaggctgc
aagaagattctcgtagctgactctttgtccttactaaagaagatgcaccgaactcaaatg
aaaggcattctggttgacgaggagaacatctgtgagtcctgtctttcccctattctccca
tcagacgcagctaagcccttcagcgtggtggtcttccactgccgccatatgttccacaag
gagtgcctgcctatgaccagcatgaactctcctgtgcagttctgtaacatctgcagtgca
aagcaccggggaccaggaagtgctattctggagatgaaaaaatag
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