Orcinus orca (killer whale): 101275587
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Entry
101275587 CDS
T05247
Symbol
YTHDC1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101275587 (YTHDC1)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101275587 (YTHDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
101275587
NCBI-ProteinID:
XP_004268393
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Position
4:complement(68568480..68603206)
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AA seq
738 aa
AA seq
DB search
MAADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKNEKKGSKRKSDRMESTDTKRQ
KPSVHSRQLISKPLSSSVSNNKRMVSTKGKSVTEYKNEEYQRSERNKRLEADRKIRLSSS
ASRESYKSQSEKTCLRKRDPERRVKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYG
SDHETGSSGSSDEQGNNTENEEEGVEDVEEDEEVEEDAEEDEEVDDDGEEEEEEEEEEEE
EEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSDSESVSFTDGSVRSGSGTDGSDEK
KKERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARF
FLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFARLSS
ESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDG
QEIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQPRSRGRPSRREPVRDVGRRRP
EDYDIHNSRKKPRIDYAPEFHQRPGYLKDPRYQEVDSFTNLIPNRRFSGVRRDVFLNGSY
NDYVREFHNMGPPPPWQGMTPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHPVPHEARYR
DKRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERER
ERLCDRDRDRGERGRYRR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacagccgagaggagaaagatggagaacttaatgttctagatgatattttg
actgaagtaccagaacaggacgatgaactctataatccagagagtgaacaagataaaaat
gagaaaaagggttcaaaaagaaaaagtgaccgaatggaatctactgacacaaagcgacaa
aagccttctgttcattcaagacaattgatttctaagccactgagctcatcagttagcaat
aacaaaagaatggttagtacaaaaggaaagtcagtcacagagtataaaaatgaggaatat
caaagatctgaaagaaacaaacgtctagaagctgatcggaagattcgtttgtcaagcagt
gcctccagagaatcttataagagtcaatctgagaaaacatgtctgcggaaaagggatcct
gaaaggagggtcaaatcccctacaccagatggttctgagagaattgggcttgaagtggat
agacgtgcaagcagatccagccagtcttccaaggaggaagtgaactctgaagaatatggc
tctgaccatgagactggcagcagtggttcttctgatgagcaaggcaacaacactgagaat
gaggaggaaggggtggaagatgtggaggaagatgaagaagtagaagaagatgcagaggaa
gatgaagaggtggatgatgatggagaggaggaagaggaggaagaagaagaggaagaggag
gaggaggaggaagaggaggaggaggaagaagaagaatatgaacaggatgagagagaccag
aaggaagagggaaatgattatgacacccggagtgaggctagcgactccgattctgaatct
gtttccttcacggatgggtctgtcagatctggttcaggaacagatggatcagatgagaaa
aagaaggaaaggaagagagctagaggcatatctcctattgtttttgatagaagtggaagc
tctgcatcagagtcatatgcaggttcagaaaagaagcatgagaaattatcatcttccgtt
cgtgctgtccgaaaagatcaaaccagtaaactcaaatatgtcctacaggatgcgagattt
tttctcataaagagtaacaaccatgagaatgtgtcccttgccaaagctaagggtgtatgg
tctacactgccagtaaatgagaagaaattaaatgctgcattcagatctgcaaggagtgtt
atcttaatattttctgtgagagagagtggaaaatttcaaggatttgcaagactttcttca
gaatcacaccatggaggatctcctatacattgggtacttccagcaggaatgaatgctaaa
atgctgggaggcgtctttaaaattgactggatttgcaggcgtgaattacccttcactaag
tcggctcatctcaccaatccttggaatgaacataagccggtaaagatcggacgtgatgga
caggaaattgaacttgaatgtggaacccagctttgtcttctatttccccctgatgaaagt
attgacttgtatcaggtcattcataaaatgcgtcacaagagaagaatgcattctcagccc
cggtcaagaggacgtccatcccgtcgagaaccagtccgggatgtgggaaggcgtcgacca
gaagattatgatattcataacagcagaaagaaaccaaggattgactatgcccctgagttt
catcagagaccagggtatttaaaggatccacgataccaggaagtagatagtttcacaaat
cttattcccaacagacggttttcaggagttcgccgagatgtgtttttaaatgggtcctac
aatgattatgtgagggaatttcataacatgggaccaccaccaccttggcaaggaatgact
ccttatcctggaatggaacaacctccacaccatccttactatcagcaccatgctccacct
cctcaagctcatcccccctactcaggacatcacccagtaccacatgaagcaagatacaga
gataaacgagtacatgattatgatatgagggtggatgatttccttcgtcgaacacaagct
gttgtcagtggtcggagaagtagacctcgtgaaagagatcgggagcgagagcgagaccgc
cctagagataacagaagagacagagaacgagatagaggacgtgatagagaaagagaaaga
gagagattatgtgatcgggacagagaccgaggggagagaggtcgatatagaagataa
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