Orcinus orca (killer whale): 101275750
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Entry
101275750 CDS
T05247
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101275750 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oor04121
]
101275750 (TRIM54)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101275750 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
PHP
UvrD_C
MIF4G_like_2
COG2_C
DUF1421
DUF349
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101275750
NCBI-ProteinID:
XP_049552181
LinkDB
All DBs
Position
13:complement(70605367..70623591)
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AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDSLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGISM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQSFEALCAVLEERKGELLQALALKQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELGG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEDEEVALDGEEGSAGPEEERLEGS
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacagcctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaatgacgtcttccaggcctcaaaccct
ctgtggcaatcccggggctccaccactgtgtcttcaggaggccgtttccgctgcccgtct
tgcaggcatgaggttgtcctggaccgacatggtgtctacggcctgcagcggaacctgcta
gtggagaacattatcgacatttacaagcaggagtcctcccggccgctgcattccaaggct
gagcagcacctcatgtgcgaggagcatgaagatgagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggcgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgccagaagagtgagctcagtgatggcatctcgatg
ctggtggcaggcaatgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accattgaggacaacagccggaggcagaagcagttgctaaaccagagttttgaggccctg
tgcgcagttctggaggagcgtaagggtgagctgctgcaggcgctggccctgaagcaggag
gagaagctgcagcgcgtcaggggcctcatccgccagtacggagaccacctggaggcctcc
tctaagctggtggagtccgccatccagtccatggaggaaccgcagatggcgctctatctg
cagcaggccaaggagctgatcaataaggtcgggacaatgtcaaaggtggagctgggtgga
cggccggagccgggctatgaaagcatggagcaattcaccgtgagcgtggagcatgtggcc
gaaatgctgaggaccatcgacttccagccaggcgcttctggggaggaagaggatgaggag
gtagcgttggacggggaagagggcagcgcagggccagaggaagagcggctggaggggtcg
gaaggcctgcactga
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integrated database retrieval system
