Orcinus orca (killer whale): 101275848
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Entry
101275848 CDS
T05247
Symbol
RAD23B
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03420
Nucleotide excision repair
oor04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101275848 (RAD23B)
09124 Replication and repair
03420 Nucleotide excision repair
101275848 (RAD23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oor03051
]
101275848 (RAD23B)
03400 DNA repair and recombination proteins [BR:
oor03400
]
101275848 (RAD23B)
Proteasome [BR:
oor03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
101275848 (RAD23B)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101275848 (RAD23B)
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Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
Dsc3_N
UBA_2
DUF1421
Ubiquitin_2
UBA_9
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
101275848
NCBI-ProteinID:
XP_033287143
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Position
6:95070267..95114733
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AA seq
410 aa
AA seq
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MLVTLKTLQQQTFKIDIDPDETVRALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVTKPKAVTTPAPATTQQSNSATTTTVSSSTAPTVVQAPTPAPTLAPA
PTPTPASVTPASTTASSEPAPASATKQEKPAEKPAETPVAASPTSTDSTSGDSSRSNLFE
DATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAV
VDPPPAASTGAPQSSVAAAAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQIIQQNPSLL
PALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGSGGGSGGIAEAGSGHMNY
IQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDED
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaccctgaagaccctacagcagcagaccttcaagatcgacatcgacccagac
gagacggtaagagcactgaaagagaagattgaatctgaaaagggtaaagatgcctttcct
gtagcaggtcaaaaattaatttatgcaggcaaaatcctcaatgatgatactgctctaaaa
gaatataaaattgatgagaaaaacttcgtggtagttatggtgacaaaacccaaagcagtg
acaacaccagcaccagctacaactcagcaatcaaattctgccaccactaccacagttagt
tcctccacagcaccaactgtggttcaggccccaacccctgcccccactttggctcccgct
cccactcccacacctgcatctgtcactccagcatcaacgacagcgtcttctgaacctgca
cctgctagtgcaacgaaacaagagaaacctgcagaaaagccagcagaaacaccagtggct
gctagcccaacatcaactgacagtacatcaggtgattcttctcggtcaaacctttttgaa
gatgcaacaagtgcacttgtgacaggtcagtcttatgagaatatggtaactgagatcatg
tcaatgggctacgaacgagagcaagtaattgcagccctgagagccagtttcaacaaccct
gacagagcagtggagtatcttttaatgggaattcccggagatagagaaagtcaggctgtg
gttgacccccctccagcagcgagtactggggctcctcagtcttcagtggctgcagcagca
gcaactacgacagcaacgactacgacaacaagttctggagggcaccctcttgaattttta
cggaatcagcctcagtttcaacagatgagacaaattattcaacagaatccttccctgctt
ccagcattgctacaacagataggtcgagaaaatcctcagttactgcagcaaattagccaa
catcaggagcattttattcagatgttaaatgaaccagttcaagaagctggtggtcaagga
ggaggcagtggaggtggcagtggaggaattgcagaagctggaagtggtcatatgaactac
attcaagtaacgcctcaggaaaaagaagctatagaaaggttaaaggcattaggatttcct
gaaggacttgtgatacaagcatattttgcttgtgagaagaatgagaacttggctgccaat
tttcttctacagcaaaactttgatgaagattga
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