Orcinus orca (killer whale): 101276142
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Entry
101276142 CDS
T05247
Symbol
CLDN20
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03272
Virion - Hepatitis viruses
oor04382
Cornified envelope formation
oor04514
Cell adhesion molecule (CAM) interaction
oor04530
Tight junction
oor04670
Leukocyte transendothelial migration
oor05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
101276142 (CLDN20)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101276142 (CLDN20)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101276142 (CLDN20)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101276142 (CLDN20)
09158 Development and regeneration
04382 Cornified envelope formation
101276142 (CLDN20)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
101276142 (CLDN20)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oor03037
]
101276142 (CLDN20)
04147 Exosome [BR:
oor04147
]
101276142 (CLDN20)
Cilium and associated proteins [BR:
oor03037
]
Other cilia and associated proteins
Stereociliary proteins
101276142 (CLDN20)
Exosome [BR:
oor04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
101276142 (CLDN20)
Exosomal proteins of colorectal cancer cells
101276142 (CLDN20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Zip
DUF7555
Motif
Other DBs
NCBI-GeneID:
101276142
NCBI-ProteinID:
XP_049551147
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All DBs
Position
12:complement(11607323..11609929)
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AA seq
216 aa
AA seq
DB search
MISAGLQLLAFALALTGVSGVLMATLLPNWKVNVDPGSNIITAIVQMQGLWMDCTWYSTG
MFSCTLKYSVLALPTHVQAARAAMVLACVLSAVGMCTATIGMKCIRLGGDRETKSYACFA
GGVCLMSAGISGLIPTVWYTKEIIANFVDVTVPESNKHEPGGAVYIGFISAMLLFISGMI
FCIKKDSEAWLHPSKQEHVPTTQPEDRSANSLKDYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgatatcggcgggtctccagctccttgcttttgccctggccttaactggggtctctgga
gtgctcatggccaccctgctgcccaactggaaggtgaatgtggacccgggctccaacatc
atcacagccatcgtgcagatgcaagggctgtggatggactgcacgtggtatagcaccggg
atgttcagctgcaccttgaagtactccgtcctggccctccccacccacgtgcaggccgct
cgggccgccatggtcctggcctgtgtcctgtctgctgtggggatgtgcactgccacaatc
gggatgaaatgcattcgcttaggaggggacagggaaaccaagagttacgcttgttttgct
gggggagtctgcctcatgtctgcggggatctctggtttaataccgacagtgtggtacacg
aaggagatcatagcaaactttgtggatgtgacagttccagaaagcaacaaacatgaaccc
ggaggagctgtctacattggattcatttcggccatgctgctgtttatctctggcatgatt
ttctgtataaaaaaggattcggaggcttggctccacccatccaagcaggagcacgtcccc
accacacagccagaggaccgttcagcaaacagcctgaaggattatgtgtga
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