Orcinus orca (killer whale): 101276645
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Entry
101276645 CDS
T05247
Symbol
PCGF2
Name
(RefSeq) polycomb group RING finger protein 2 isoform X1
KO
K11460
polycomb group RING finger protein 2
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03083
Polycomb repressive complex
oor04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101276645 (PCGF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101276645 (PCGF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101276645 (PCGF2)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
101276645 (PCGF2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-Nse
zf-C3HC4_4
RING_ZNF598
zf-RING_10
Rad60-SLD
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101276645
NCBI-ProteinID:
XP_012393211
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Position
19:43092986..43104332
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AA seq
411 aa
AA seq
DB search
MWRESRAKNSVAGHLKEQKGTSGLSEIGYFCSGKRKKTNAERSLNYGGASRKRLGDAPQS
PAPHPGIMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYC
PMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVPNGSNED
RGEVLEQEKGALSDDEIVSLSIEFYEGVRDREEKKGPLENGDGDKEKTGVRFLRCPAAMT
VMHLAKFLRNKMDVPSKYKVEVLYEDEPLKEYYTLMDIAYIYPWRRNGPLPLKYRVQPAC
KRLTLPTAPTPSEGTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPS
APHPTSPTPPATASGATTAANGGTSNCLQTPPSTSRGRKMTVNGAPVPPLT
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggaaagcagagcaaagaattctgtagctgggcatctgaaggagcagaaggga
acctctgggttatcagagattggctatttctgcagtggaaaaagaaaaaaaactaacgct
gagagaagtctaaattacgggggagcttccagaaaaagactgggtgacgctccccagtcc
cctgccccccaccccggcatcatgcatcggaccacacggattaaaatcacagagctgaac
cctcacctcatgtgtgccctctgtggggggtacttcatcgatgccactaccatcgtggag
tgcttgcattccttctgcaaaacctgcattgtgcgctacctggagaccaacaagtactgc
cccatgtgcgacgtacaggtccacaaaacccggccgctgctgagcatcagatctgacaaa
acccttcaagacatcgtctacaaattggtccctgggctttttaaagatgagatgaaacgg
aggcgggatttctacgcagcctaccccctgacagaagttcccaatggctccaacgaggac
cgtggtgaggttctggaacaggagaagggggctctgagcgacgatgagatcgtcagcctc
tccatcgagttctatgaaggcgtcagggaccgggaagagaagaagggccccctggaaaat
ggggatggtgacaaggagaaaacaggggtgcgcttcctgcggtgcccagcagccatgacg
gtcatgcatctcgccaagtttctccgcaacaagatggacgtgcccagcaagtacaaggtt
gaggttctctatgaggacgagccgctgaaggaatactacaccctcatggacatcgcctac
atctacccctggcggcggaatggccctctccccctcaagtatcgcgtccagccagcctgc
aagcggctcaccttgcccacagcgcccaccccctccgagggcaccaataccagcggggcg
tctgagtgtgagtcagtcagcgacaaggctcccagccctgccaccctgccggccacctcc
tcctccctgcccagcccagctaccccctcccatggctctcccagctcccatggcccctcg
gccccccacccgacctcccccacgccccccgccacagccagtggggccaccacagctgcc
aacgggggcacctcgaactgcctgcagacaccgccttccaccagcagggggcgcaagatg
actgtcaacggagctcccgtgccccccttaacttga
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