Orcinus orca (killer whale): 101276792
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Entry
101276792 CDS
T05247
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oor04040
]
101276792 (PKD1L2)
04091 Lectins [BR:
oor04091
]
101276792 (PKD1L2)
Ion channels [BR:
oor04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101276792 (PKD1L2)
Lectins [BR:
oor04091
]
C-Type lectins
Others
101276792 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PLAT
SUEL_Lectin
REJ
GPS
Motif
Other DBs
NCBI-GeneID:
101276792
NCBI-ProteinID:
XP_049559588
LinkDB
All DBs
Position
20:7196503..7280056
Genome browser
AA seq
2291 aa
AA seq
DB search
MSTLALVLLGLALVFRAITAKPEDGSFCSKSQVAFRDACCEFVPLGRTFYGAQSWCEEQS
SWKPYLILRSARTPSSNPRTFRIRRTLPSPGGHIPIPGPRIWLDTSNVSYRIWRRGQDAS
VTNPWGYNGRDPSFGWLPSDNCMQKFAFICEFGVGQSLACENLNATMHCGSGEVIQIQDA
FYGRQTPHYCIQDAGDPSDLEEECNWVSVKDEVAGRAQGLCSSGCKGLQACQVAANGTYF
GDLCPTWGSYLWVQYHCQEGESPTCLGVGIPFLSVALLGAEGAALHGEFHLFFFFFFAVH
GPPTAVASSVAEHRLQTHRLSGHGSWTQPLRGMWNPPRPGHKPMSPASAGGLATTAPPGK
PESFIFDNVTTSLTWLLCPYIGTLSCIINMGDGHTFDPYYPTSLSSSVFHQFTAPGEFTV
FVECTTSEWNVIAQKQVTMXDKMERLCVTGCSGLSTSGTSPLSWAVFRDPLWIQVELDGG
TGVTYTVLSGNTTLAEFTTQRVPLPYSVTLDGAVQQRMGPGMHHLEIXATSNTTTSAPSR
NITIHFVEPLSGLQASWXSGNLELGQDLLVNVSAAHGIPERLNFEVAGLNATFSHEKESL
GGPFGTYHVAVPLEGTFLVTVLVRNAFSNLSLKIGSITVTAPFSLQEPPGTKAQEKNRDR
GDVELXVEPGQYLDPFTTVTLGWPDSNKDFRFQWACGHCWAQWSDCVERQLRRTDQRELV
VPPSCLPTPESAVTLRLAVWRGRELENLEKQCLCVSDPLELRPRVSCEENCRPVNASRGV
MLKVTVGDKSAAAVFSWYLDDTLLEKAEPLPAACRLQGFWPRSLILLQSDTLLLNSSFLR
TSSQATGTRVRAVTRHAYREGTYVISSXLPTCTTAPEEGTVLTSFAIFCNASAALGLLEY
CFCLESGSCLHCGPEPALPSVYLPLGAENNDFMLTVVISVCNHVGDRQHTQAAVKAARGG
TRVEDAAFQAAVWDNVTATLQGGHGPEQLFQLARSVSSVLDQQCQGPGSGQPLREDASKR
AHPVSAGSLPAVSTTLGDMQKVQELAKALKEVTRRSEELTPLAQQEASRALQHASEALLA
VSAEAHPEDQRHQEATGDLFQAVCSMLEASLRDRPEEPAGASGSQVAIVPQLLGAVGHMQ
AAVLPGGLPGGLPATLAAPSISVYTNRIQPRSXRGSPVHVAAASSATFTLPAAPSLGSME
DGRVPVDIRMKSFPKNPFPARSHFDVSGTVGGLPLTSPSGQLIPVKNLSEDIKILLPQLS
EGHSEPTVLNLTRPEALWVNLTSGGVALGIQLHWRPDIPLMLSLGYGYHPSVPSDDAQAH
LLPTAVPDGLSTWILSPEDLHFGEGIYYLTVIPQSDLEPAPGRDFTVGITTFLSHCVFWD
EVQGTWDNSRCQVGPRTTRSQIPRLCNHLTFCGSTLLVKPNAVDVRQTAELFATFADSPV
VVTTIGCLCVAYVLVVIWVRRKDAQDQAKVRLHMLEDNDAFAQYHYLVTIYTGHRRGAAT
SSKVTVTLYGLDGESEPHHLSDPDIPGFEXGGVDVFLLSTLFPLGELRGLRLWHDNSGDQ
PSWYVSRVLVHDLAMDRKWYFLCNSWLSINVGDCVLDKVFPVATEQDRKQFSHLFFMKTS
TGFQDGHIWYSIFSNSAWSNFTHAHQVSCCFSLLLCTILTTIMFWGVPKDPAEQKMGLGK
IEFTWQEVMIGLDDWIGLLTFPNNLLIIQIFWNTRPWVAKEQNAGKWDGGAPSLAPSPQP
VEDGXLTPEAVTKDLWRLVSSLFKALKVPPPCSGWDFANSMDINQLLALAEDVVCQQNKA
GQVFWKEASQTGDPLTLTLGSVQVKEEMQCPRPEVGPRDAGKDSAYRQCFYLQXEHLQQE
LLLLEPQGFSQGQSHTQALGQLQTLKGCLGGQPRTPPPAHSSSGQASKPPRGLPWWCVLV
GWLLVAATSGVAAFFTMLYGLHYGRVSPLKWLTSMAVSFVESVFVTQPLKVLGFAAFFAL
VLKTVEDEEEPVAPLPGRVSGPDPSALFQARRNSRRDIYQKPLASDVEKMKTTHLKEQKA
LALIREILAHLGSLWMPLLVAYGQGDPSAXLFNRHLGHSFTXGFSAVLDFQDLFTWANTT
LVSNLDSHHPGFITDGNSKLVGSAQIRQVRVQESSCALALQLQASLDGCRVPYSLDVEDL
SDYGEGWNASVLNNSNDFSQAWQYQSQSQRLGYPIWGXLTVYRGGGYVVPLGTDRQSASR
ANTGMGNLVRRKVSATRQLSEEGEIIDLLLMKILSFLGIKCKRQEPGSSSEQPELLSEAW
APQPVSAVPQI
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccttggccttggtactcttggggcttgccctggtgtttagggccattacggct
aagccagaggatggcagcttttgctctaagagccaagtggctttcagagatgcttgctgt
gaatttgtgcctctcggccgcaccttctatggtgcccagagctggtgtgaggagcaatcg
tcctggaaaccctaccttatccttcgctcggcgaggaccccttcctccaacccccgcacg
ttcaggatcagaaggacccttccaagtcctggtggtcatattcccatcccagggcccagg
atctggctggacacctcaaatgtgagctacaggatctggcgccgagggcaggatgcttct
gtaaccaacccctggggctacaatgggagagacccttcctttgggtggttgccctcggac
aactgcatgcagaagttcgccttcatctgcgagtttggtgtcggccagagcctggcctgc
gagaacctcaatgccaccatgcactgtggctcaggggaggtgatccagatccaggatgct
ttctatgggcgccagactccccattattgcatccaggatgccggggacccctcagacctg
gaggaggaatgcaactgggtcagcgtcaaggatgaagtggcaggtagggcccaagggctc
tgtagctctggctgcaaggggctgcaggcctgccaggtggcagcaaatgggacctacttt
ggagacctgtgccccacctggggcagttacctgtgggtgcagtaccactgccaggaaggt
gagtccccaacttgcctgggtgtgggaattcccttcttatctgtagccctccttggagca
gagggtgcagctctccatggggagtttcatcttttttttttttttttttttgcagtacac
gggcctcccactgctgtggcctcttctgttgcagagcacaggctccagacgcacaggctc
agtggccatggctcatggacccagccgctccgtggtatgtggaatcctcccagaccgggg
cacaaacccatgtcccctgcatcggcaggtggactcgcaaccactgcgccaccagggaag
cccgagagtttcatctttgacaatgtcaccacctcccttacatggctcctctgtccctac
attggaactctgtcctgtataattaatatgggggatggccacactttcgatccctactac
cccacaagtttgtccagcagcgtcttccaccagttcacagcccctggggaattcactgtg
tttgtcgagtgtacaaccagcgagtggaacgtgatagctcagaagcaagtgacgatgtga
gacaagatggagaggctctgtgtgactgggtgttctggcctgtccacatcaggaaccagc
cctctctcctgggcagtcttcagggaccctctgtggattcaggtggagcttgatggagga
acaggggtgacttacactgtgctgtcaggtaacacaaccctggctgagttcaccacgcag
agggtcccgctcccctacagtgtgaccctggatggagcagtccagcaacggatgggccca
gggatgcaccacttggagatctgagccaccagcaacaccaccacctctgccccctccaga
aacatcaccatccacttcgtggagcccctgtcaggcctgcaggcctcctggngctctggc
aacttggagcttggacaggacctactggtcaatgtctcggcggctcacggtatcccggag
aggctgaattttgaggtggcaggactcaatgcaaccttctcccatgagaaagagagcctt
ggggggccatttgggacttaccacgtggcagttcctcttgaaggcacctttctggtcact
gtgctggtgaggaacgccttctcaaacttgagtttgaaaattggaagcatcactgtcaca
gctcctttcagtctccaagaaccacctggaacaaaggctcaggaaaagaatagagataga
ggggatgtggagctgtgagtggaacccggtcagtacttggatcctttcacgacagtgact
ctgggctggccagatagtaacaaggactttcgcttccagtgggcatgtgggcactgctgg
gctcagtggagcgactgtgttgagaggcagctgcgccgcacagaccagagggagttggta
gtgccaccgtcctgcctgccgacgcctgagtctgctgttaccctgcgcctggcagtctgg
agaggccgggagctggagaacctggagaagcagtgcctctgtgtgtctgaccccctggaa
ctcaggccgcgagtcagctgtgaggagaactgcaggccagtgaatgccagcaggggcgtt
atgctcaaggtcaccgtgggggacaagtctgcagcagccgtgttcagctggtatttagat
gacaccctgctggagaaggccgagcccctcccagcggcctgcagactccaaggattctgg
ccacgttctttaatcctccttcagagcgacaccctgctgctgaacagctccttcctgagg
accagcagccaggccaccggaaccagagtcagagcagtgacccggcacgcctacagggag
ggcacctacgtgatcagctccncactgcccacctgtaccactgccccagaggagggcact
gtcctgacgagctttgccatcttctgcaacgcttccgccgccctggggctcctggagtac
tgcttctgcctggagtcaggttcctgtctacactgtggccctgaacctgccctcccatca
gtttatctgccacttggagcagaaaacaatgacttcatgctgacagtggtcatttctgtc
tgcaatcatgtgggtgacagacagcacacccaggcagcagttaaggccgcacgtggaggc
acccgtgtggaggatgcggcatttcaggccgcagtgtgggacaatgtcaccgccactctg
cagggcgggcatggccctgagcagctcttccagctggccaggtctgtgtcatccgtgctg
gaccagcagtgccaagggccgggctccgggcagccgctgagagaggacgccagcaaaaga
gcgcatcctgtgtctgcggggtcactgcctgcggtcagcaccaccttgggggacatgcag
aaggtgcaggagctggccaaggcactgaaagaggtgacccgccgcagtgaggagctcacg
cccttggcccagcaggaggccagccgggctctgcagcatgccagtgaggccctgttggca
gtgagtgccgaggcccatcctgaggaccagaggcaccaggaggccactggggacctgttc
caggctgtgtgcagcatgttggaagcttccctgagggacagaccagaagagcctgcaggg
gccagtggcagccaggtagccatagtgccccagctgctaggagctgtggggcacatgcag
gccgccgtcctgccgggtggactgcccggcggccttccagccacgctggccgccccctcc
atctccgtgtacacaaacagaatacagccccggagttagcgaggctcccctgtgcacgtt
gctgctgccagctctgcgaccttcaccctgcctgctgccccctcccttggctccatggag
gatggtagggtgcctgtggacataaggatgaagagtttcccaaagaacccattcccagca
cgaagtcacttcgatgtcagtggaactgttggtggcctccctctgaccagccctagtgga
cagctcatccctgtgaagaatctgtcggaggatatcaagatcctgctgcctcagctttca
gaaggacacagcgagccaactgtgttgaacctgaccagacctgaagctctgtgggtgaac
ctgacttcagggggtgtggctttggggatccagctgcactggagacctgacatcccactc
atgctcagcctgggctacggctaccaccccagcgtgcccagtgacgacgcccaagctcac
ctcctgccaacggctgttccagatgggctgtccacatggatcctgagcccagaggacctg
cattttggagaaggcatctactatctgactgtgatcccccagtctgacctggagccagcc
cccggcagggacttcacagttggcatcaccaccttcctgtcccattgtgtgttctgggat
gaggtccaggggacttgggacaactccaggtgccaggtggggccacggaccacccgctcc
cagataccccgcctctgcaaccacctcaccttctgtggaagcacgctcctggtcaagccc
aatgccgtggacgtccgccagaccgctgagctctttgccaccttcgcggacagccctgtg
gtcgtgaccaccataggctgcctctgtgtggcctacgtgctggtggtgatctgggtgagg
aggaaggacgctcaggatcaggccaaagtgaggctgcacatgctggaggacaatgacgcc
tttgcccagtaccactacctggtgacaatttataccggacaccggaggggggcagccact
tcctcaaaggtgactgtcaccctatatggcctggatggagagagtgagccccaccacctg
tcagaccccgacatcccgggttttgagtgaggaggagtggatgtgttcttactctccacc
ctgtttcccctgggggagctgaggggcctgcggctatggcatgacaactcaggggaccag
ccatcctggtacgtaagccgggtgctggtgcatgacctggcaatggaccgtaagtggtac
ttcctctgcaactcgtggctgtccatcaatgtcggagactgtgtccttgacaaggtattt
ccagtggccacagagcaggacaggaaacaattcagccacctgtttttcatgaagacctcc
acaggcttccaggatggccacatttggtactccatcttcagcaactcagcttggagcaac
ttcacccatgcccaccaggtgtcctgctgcttctcactgctcctctgcaccatactgacc
accatcatgttctggggtgtccccaaggacccagctgagcaaaagatgggcttgggtaaa
atcgaattcacttggcaggaagtgatgattgggctggatgattggattgggctcctcacg
tttcccaacaacctcctgatcattcagattttttggaacacccgtccttgggtagccaag
gagcagaacgctgggaaatgggatgggggggcccccagcctggccccctcaccgcagcct
gtggaggatggtnctctgacacctgaagcagtgaccaaggatttgtggagactcgtcagc
tccttgttcaaagctctgaaggtgccacccccttgctcgggctgggacttcgcgaactca
atggacatcaaccaactgctggccttggcggaagacgtcgtctgtcagcagaacaaagca
gggcaggtgttctggaaggaagccagccagacaggggaccctttaacactcactcttggg
tctgtgcaagtgaaagaagaaatgcagtgccccaggcccgaggtgggcccaagagacgct
gggaaggacagtgcctacaggcagtgtttctaccttcagntggagcacctacagcaagag
ctgctgttgctggagccccagggcttttcccagggccagagccacacccaggcactgggg
cagctgcagacccttaagggttgcctagggggacagcccagaaccccgcctccagcacac
tcgagctccgggcaggcgagcaagccccctcgaggcctcccctggtggtgtgtcctggtg
ggctggctcctggtggcagccaccagcggagtggcagccttcttcaccatgctctatggc
ctgcactacgggcgggtcagccccctcaagtggctcacctccatggccgtctccttcgtg
gagagtgtgtttgtcacccagcccctgaaggtgctggggttcgctgctttctttgcgctg
gtgttgaagacagtggaggatgaggaggagcctgtggcccccctcccgggacgtgtctct
ggcccagacccctctgccttgttccaagcacgaagaaacagcagaagggacatctaccag
aagcctctggcctctgacgttgagaagatgaaaaccacccacctcaaggaacagaaagca
cttgccttaatcagagaaatcttggcgcacctgggctccctgtggatgccactgctggtg
gcctacgggcagggggaccccagcgcctaactcttcaacagacaccttgggcacagcttc
acctgaggcttttcagccgtgctggactttcaggacttgttcacgtgggccaacaccacc
ctcgtgagcaacctggacagtcatcacccaggctttatcactgatgggaactccaagctg
gtgggtagtgcccagattcgccaagtgagggtccaggaaagctcttgtgctcttgccctg
cagctgcaggcttcccttgatggatgccgtgtgccatattccctggacgttgaagacctg
tcagactatggggaaggctggaatgcctccgtcctcaataacagcaatgacttttcccag
gcttggcagtaccagagccagagccagcgcctggggtatcccatctggggctaactcacc
gtgtaccggggaggaggttacgtggtccccttggggactgatcgccaaagtgcgtcaaga
gccaatacagggatgggaaacttagtacgacgtaaagtgtccgccaccaggcaactgtcg
gaggaaggagagatcatcgatttgctactgatgaagatactcagtttcctgggcattaaa
tgtaaaagacaggagcctggaagcagcagtgagcagcctgagttgctgtcagaggcctgg
gcccctcaacctgtatcagctgtgccccaaatttaa
DBGET
integrated database retrieval system
