Orcinus orca (killer whale): 101276843
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Entry
101276843 CDS
T05247
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101276843 (NPAS1)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101276843 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
101276843
NCBI-ProteinID:
XP_004271171
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Position
20:50455900..50472409
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AA seq
594 aa
AA seq
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MAAPYPSSGGGGEVRCGGGRGGSVPWDFLPGFVVKTPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRSAGPQVGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SLFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSSLADTPEIEASPIEVP
PSSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAE
LPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDL
LDKGQVMTGYYRWLQRAGGFVWLQSVATVAMSGKSPGERHVLWVSYVLSQAEGGQIPLDA
FQLPASVAHEDTSSPEPAPTEPEPPVEGKEAVPPQEDKAPQPRGKPIKVEPGPGETEDPE
DSGDEKPSGHLAPTRPEFTSVIRAGALKQDLVGPWGLAPPGDPPPSLLHTGFLPPVVRGL
CAPGTIRYGPAELGLVYPHLQRLGPGPTLPEAFYPALGLPYPGPLGTRVQRKGD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccctaccccagcagtggcggtggaggcgaggtcaggtgcgggggaggtcgc
ggcggcagcgtcccttgggactttctgccggggtttgtggtcaagaccccgcccggaccc
tgcctgcaggcgcagcgcaaggagaagtcccgtaacgcggcgcgctcgaggcgcggaaag
gagaacctggagttcttcgagctggccaagctactcccgctgcccggagccatctccagc
cagctggacaaggcgtccatcgtgcgcctcagcgtcacctacctccgcctgcgccgcttc
gccgctctcggggcgccaccctgggggttgaggtccgcggggccgcaggttggcctagcc
ccaggccgcaggggccccgtggcgctggtctccgaagtcttcgagcagcacctgggagga
cacatcctgcagtccctggacggcttcgtgtttgccttgaaccaggaagggaagttcctc
tacatctcagagacagtctccatttatctgggtctctcacaggtggagctgacgggcagc
agcctcttcgactacattcatccgggggaccactccgaggtgctggagcaactggggttg
cgggccccgacccccgggccccccaccccgccctccgtcccctcctcttcctcctcctcg
tcctcatcctcctcgcttgcggatacccctgagatcgaggccagccccatcgaggtgccc
ccctcctcccgggtccaggagcgctccttcttcatccgcatgaaatccaccctcaccaag
agggggctgcacgtcaaggcctcagggtacaaggtcatccatgtgaccggtcgccttcgg
gcccgcgccctgggccttgtggcccttggccacacgttgcccccggccccactggctgag
ctgccactgcacggacacatgatcgtcttccgactcagcctgggtctcaccatccttgct
tgtgagagcagagtcagcgaccacatggacctggggccctcggagctagtgggccgcagc
tgctaccagtttgtccacggacaggatgcaaccaggatccgccaaagccacctggacctg
ctggacaagggccaggtgatgaccggttactaccgttggctgcagcgcgccgggggcttc
gtgtggctacagtccgtggccaccgtggccatgagcgggaagagccctggagagcgccac
gtgctctgggtcagctacgtgctcagtcaagccgaggggggccagatacctctggacgcc
ttccagcttccggccagcgtggcccatgaggacacgtccagcccggagccagcacccaca
gagccagagccaccagtggaaggaaaggaggccgtccccccgcaggaggacaaggccccc
cagccccggggcaaacccatcaaagtggagcccggcccgggggagactgaagacccggag
gacagtggggatgagaagccgtccggccacctggccccaacgaggcccgagttcacgtcc
gtcatccgggcgggtgccctgaagcaggacctggtggggccgtggggcctggcgcctcct
ggggaccccccaccttccctcctgcacactggcttcctgccccccgtggtgcggggcctg
tgcgcacctggcaccatccgctacggccctgccgaactgggcctcgtgtacccgcacctg
cagaggctgggcccgggccccaccctccccgaggccttctaccccgcgctgggcctgccc
tacccggggcccctgggcaccagggtacagcggaagggggactga
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