Orcinus orca (killer whale): 101276980
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Entry
101276980 CDS
T05247
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03013
Nucleocytoplasmic transport
oor05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101276980 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101276980 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101276980 (NUP160)
03036 Chromosome and associated proteins [BR:
oor03036
]
101276980 (NUP160)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101276980 (NUP160)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101276980 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
101276980
NCBI-ProteinID:
XP_004264161
LinkDB
All DBs
Position
8:12666742..12721628
Genome browser
AA seq
1402 aa
AA seq
DB search
MATAGAVERSFVELSGAERERPRHFREFTVCCIGTANVVAGAVKYGESAGGFCYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCILLPGGVHVSETPNHVIIL
ILTNQTVHRLLLPHPSRMYRSELVIESQMQSIFTDIGKVDFRDPCNYQLIPTVPGLSPHS
TTSAAWLSNDGEALFAVPSASGGIFVLKLPPHDVPGMVSVVELKQSSVMQRLLIGWMPTV
IRGDQGPSDRPLSLAVHCVKNDAFIFALCQDHKLRMWSYKEQMCLMVADMLEYVPVNKDL
RLTAGTGHKLRFAYSSTLGVCLGIYMHAPKRGQFCIFQLVSVENNRYSIDHISSLFTSQE
TLIDFALTSTDIWVLWHDAENQTVVKYINFEHNVTGQWNPVFMQPLPEEEIIIRDDQDPR
EMYLQSLFTPGRFINAALCKALQIFCRGTDRNLDLSWNELKKEVTLAVESELQGSVTEYE
FSQEEFRNLQQEFWCKFYACCLQYQEALSHPLALHVNPHTNMVCLLKKGYLSFLVPSSFV
DHLYLLPDENLLTEDETIISDDVDVARDVVCLIKCLRLIGESVTTDMSVMMEMSCYNLQS
PEKAAEQILEDLIAIDVDSVMEDICSKLQEIRNPIHAIGLLIREMDYETEVEMEKGFDPA
QPLNIRMNLSQVYGSSTAGRIVCRSVCKIASTRFLICRDLLILQQLLMRLGDAVILGAGQ
LFQAQQELLHRTAPLLLSYYLIKWGSQCLATDVPVDTLESNLQHLSVLELTDSGALMANK
FVSSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTELNWPEMITAITSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSHAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTYNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGASPKRNHDGECTAAPTNRQ
IEILELEDLEKECSLARIRLTLAQHDPSAVAVAGSSSAEEMVTLLVQAGLFDTAIALCQT
FKLPLMPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLEKYKVHNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENSANSHNIALSQKILD
KLEDYQQKVDKATRDLLYRRNL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgggagccgtggaacggagcttcgtggagctcagcggagctgagcgcgaa
aggccgaggcactttcgggagttcacagtttgctgcattggaactgcaaatgtcgtggcc
ggagccgtgaaatacggtgagagcgcgggaggcttctgttatgtggaaagtggcaagttg
ttctccgtcaccagaaacaggttcattcattggaagacctctggagatacattggagctg
gtggaagagtcactggacataaatctgttaaataatgcagttcgcctcaaattccaaaat
tgcatcctcttacccggaggggttcatgtctctgagactccgaatcatgtgataatcttg
atattaaccaatcaaacagtgcacaggttacttttaccacacccttcccggatgtatagg
agtgagttggtaattgaaagtcagatgcagtcaatattcactgacattggaaaagttgac
ttcagggatccttgcaactatcagttaattccaacagtacctggactctcccctcattct
accacctcggcagcctggcttagcaatgacggggaggctctgtttgctgtaccatctgcc
tctgggggaatctttgttcttaaactacctcctcatgacgtacctgggatggtgtcagtt
gtggagctgaaacagagttcagtaatgcaacgattgcttataggctggatgccaacagtt
atcagaggtgatcaggggccttcagatcgtcccctgagtcttgctgttcattgtgtcaag
aacgatgccttcatctttgctctatgtcaggatcataaactacgaatgtggtcttataag
gagcaaatgtgcctgatggtagctgacatgctagagtatgtccctgtgaataaagatctt
cggctcactgctgggactggacacaaattacgatttgcctattcctctaccctgggagtc
tgcctagggatatacatgcatgcaccaaagcgaggacagttctgcattttccagttggta
agcgttgagaataaccgctacagcatagatcacatttcctcactattcacttctcaggag
acactgattgactttgccttaacctctacggatatctgggtcttgtggcatgatgctgag
aaccaaacagttgtgaaatatatcaactttgaacataatgttacaggtcagtggaatcca
gtttttatgcagcctctgccagaggaagaaatcattatcagagatgatcaagaccccaga
gagatgtatttgcagagtctttttacaccagggcgattcattaatgcagctttatgtaaa
gctttacagattttctgtcgaggaactgacaggaatttagatctctcctggaatgaacta
aagaaagaagttactttagctgttgaaagtgagctccaaggaagtgtaacagagtatgaa
ttttcccaggaagagttccgaaatttacaacaggaattttggtgcaagttctatgcctgc
tgtcttcagtatcaagaagccctttctcatcctcttgccctacatgtgaatccacacaca
aacatggtgtgcctgctgaaaaaagggtacctgtctttccttgtgccttcctcctttgtg
gatcatttatatctcctacctgatgagaatcttttgacagaggatgagacaatcatatct
gatgatgtggatgttgctcgggatgtcgtatgtctcataaaatgccttcggctgattgga
gagtcagtaactacggatatgtcagtaatgatggaaatgagttgttacaacctacagtct
ccagaaaaggctgcagaacagattctggaagatttgatcgctattgatgtagacagtgtg
atggaggatatttgtagtaaactgcaagagattaggaacccaatccatgccattggactt
cttatacgggaaatggattatgaaacagaagtggaaatggaaaagggattcgatccagct
cagcctttgaatattcgaatgaatctttcccaggtctatggtagtagcacagcagggcgt
attgtgtgcagaagtgtgtgtaaaattgccagtactcgcttcctcatctgccgagacctc
ttgatcttacagcagctactaatgaggctaggagatgcagtgattttgggagctggtcag
ctcttccaggctcagcaagaactactacatcgaacagctcccctcctcttatcttattac
ctcattaaatggggaagtcagtgcttggctactgatgttccagttgacacactggagtct
aatcttcaacatttatcagtactggaactaactgactctggtgctttaatggcaaataag
ttcgtatctagccctcagacaattgtggagttattcttccaagaagttgcaagaaaacac
attatatctcatttgttctctcaaccaaaggcacctctaagccagactgagttgaactgg
cctgagatgattactgcaattaccagttacttattgcagcttttatggcctagcaatcct
ggttgcctctttctagaatgtttgatgggaaattgtcagtatgtacaattgcaggattat
attcaactgctacatccctggtgtcaagtcaatgttggttcctgtcgatttatgctggga
cggtgttacctggttacaggagagggacagaaggctctggaatgtttctgccaggcagca
tctgaagtgggcaaagaggaattcttagatcgcttgatccgttcagaggatggggagatt
gtgtccacccccaggctgcagtattatgataaggttttgcgtctgctcgatgtcgttggg
ttgcctgaactggttattcagttggctacatcagcaataactgaagcaggtgatgactgg
aaaagtcaggctactttaaggacatgcattttcaaacatcatttggatttaggtcacaat
agccacgcatatgaagccttaacccaaattcctgattccagcagacagttagattgttta
cggcagctggtggtagttctttgtgaacgctcacagctacaggatcttgtagagtttccc
tatgtgaatctgcataatgaggttgtgggaataattgaatcacgtgcgagagctgtggac
cttatgacttacaattactatgagcttctgtatgccttccacatctatcgtcacaattac
cggaaggctggcacagtgatgtttgagtacggaatgcgtcttggcagagaggttcgaact
ctccggggacttgagaagcaaggcaactgttatctggctgctattaattgtttacgcctt
attcgcccagaatacgcatggattgttcagccagcatctggtgcagtgtatgatcgccct
ggagcatcccctaagaggaatcatgatggagaatgcacagctgccccaacaaatagacaa
attgaaatcctggaactagaagatctggagaaagagtgttccttggctcgcattcgcctc
actctagctcagcacgatccctcagcagtcgcggttgcaggaagttcgtcagcagaggag
atggtcactctcttggttcaggctggcctctttgacactgccatagcactctgccagact
tttaagcttcccttaatgccagtctttgagggacttgctttcaaatgcatcaaattgcag
tttggaggagaggcagcccaagcagaagcctgggcctggctagcagccaatcagctctca
tcagtcatcaccactaaggagtctagtgctacagatgaagcatggaggctattatcaact
tacctggaaaagtacaaagtccacaataacttatatcaccactgtgtaatcaacaagctc
ttgtctcatggagtgcctctgcctaactggcttataaacagttataagaaggttgatgct
gctgagttgctccgtctctacttaaactatgaccttttagaagaagctgtggatttggtt
tcagaatatgtggatgctgtattgggaaaaggacatcagtactttggaattgagtttcca
ctgtctgcaacagctccaatggtgtggctcccatactcttccattgatcagcttctgcag
gctctgggagagaacagtgccaacagtcacaacattgcactgtcccagaaaatacttgac
aaattggaggactaccagcaaaaagttgataaggcaacacgggatttattatatcgtcgg
aacttgtga
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integrated database retrieval system
