Orcinus orca (killer whale): 101277667
Help
Entry
101277667 CDS
T05247
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oor04121
]
101277667 (RBBP6)
Enzymes [BR:
oor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101277667 (RBBP6)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
U-box type E3
101277667 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101277667
NCBI-ProteinID:
XP_004268634
LinkDB
All DBs
Position
16:68329226..68360635
Genome browser
AA seq
1796 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPQLPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSTHPAPSISSLTSNQSSLAPPVPGNPSSTPAPVPDITATVSISVH
SEKSDGPFRDSDNKILPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLLH
GQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSER
SQRTQGPSLPANPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPP
PGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEF
TNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSR
SHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSP
NKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKY
YKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREEYSGGQSHRSRNIGGNYPEK
LSSRDSHNQKDNTKSKEKESENVSGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSR
EPTSGEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKR
KNDGSAVSKKETVAKPAKGPQEKLDGEREKSPRSEPPLKKAKEETPKTDNVKSSSSSQKD
EKIIGTPRKAHSKSVKEHQETKPVKEEKVKKDYSKDVKSEKLTSKEEKTKKPNDKSKPLD
SKGEKRKRKTEEKGGDKDFESSSMKISKLEVTEIVKPSPKRKMELDIEKLDRTPEKDKIS
SSTAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSGKVKQEKIKGKVRRKVTGTEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDVKSTTQPISSVGKPASVIKNVSTKPSNAVKYTEKENESSEKIQKLTKE
VSHEITQHEVKSSKNSASSEKGKTKDRDHSVLEKENPEKRKNSTQPEKDSNLDRLNEQGN
FKSLSQSSKETRTSGKEDKHDSIRGSSNKDFTPNRDKKTDYDNREYSSSKRRDERNELTR
RKDSPSRSKDSAAGQKTKPREERDLPKKGTGDSKKSNSSPSRDKKPHDHKSTYDTKRSSE
ETKSVDKNPCKDREKHVLEAKNNKESSGNKSLYILNPPDPQIEKEQVTGQIDKNTIKPKP
QLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEETSGKISKELKDKVMEKAKES
LDMAAVSQVGVTRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKK
KHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgataccgtcacctttgat
gggctccatatctccctctgcgatttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatacgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacgaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccagtcaattacatgaagaaacctctaggtccaccacctccatcttatact
tgtttccgttgtggtaaacctggccattatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagttttatgatg
gaggtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatatgcaata
ccaactatagatgcagaagcatatgcaattgggaaaaaagaaaaaccaccttttttacca
gaggaaccatcatcatcttcagaagaagatgatcctatcccagatgaattgttgtgtctc
atctgcaaagatattatgactgatgctgttgtcattccatgctgtggaaatagttattgt
gatgaatgtataaggacagctctcttggaatcagatgaacatacatgtccaacatgtcat
cagaatgatgtctctcctgatgctttaattgccaataagttcttacggcaggctgttaat
aacttcaaaaatgaaactggttatacgaaaagactaagaaaacagttacctccaccccca
ccccaactaccacctccaagaccactcattcaacggaacctacaacctctgatgaggtct
ccaatatcaagacaacaagatcctctgatgattccagtgacatcatcaactcacccggct
ccatccatatcttcattaacctctaatcagtcttccttggcccctcctgtgcctggaaat
ccatcttctaccccagcccctgtacctgatataactgcaacagtctccatatcagtccac
tcagaaaaatcagatggaccttttcgggattctgataataaaatactgccagctgcagca
cttgcatctgaacattcaaagggagcctcttcaattgcaattactgcccttatggaagag
aagggttaccaggtgcctgtacttggaaccccatctttgcttggacagtcattattgcat
ggacaattgatccccacaactggtccagtaagaataaacactgctcgtccaggtggtggt
cgaccaggttgggaacattccaacaagcttggatatctggtttctccaccacagcaaatt
agaagaggggagagaagctgctacagaagtataaaccgtggacgacaccacagcgaaaga
tcacagagaactcaaggcccatcactaccagcaaatccagtttttgtacctgtcccaccc
cctcccttgtatcctcctcctccccacacgcttcctctccctccaggtgttcctcctcca
cagttttctcctcagtttcctcctggccagccaccacctgctgggtatagtgttccccct
ccagggtttcctccagctccggccaatttatcaacaccttgggtatcatcaggagtacag
acagctcattcaaataccatcccaacaacacaagcaccacctttgtccagggaagaattc
tatagagagcaacgacgactaaaagaagaggaaaagaaaaagtccaagctagatgagttt
acaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgc
tcattttccaggtccaaatctccctatagtggttcatcctattcaagaagttcatatact
tattctaaatcaagatctggttcaacacgatcacgttcttattctcgatcatttagccgc
tcacattctcgttcctattcacgatcacctccataccccagaagaggcagaggaaaaagt
cgaaattaccgttcacggtctagatcgcacgggtatcatcgatctaggtcaaggtcaccc
ccatatagacggtatcattcacgatcaagatctcctcaagcatttaggggacaatctcct
aataaacgtaatgtacctcaaggagaaacagaacgtgaatattttaacaggtacagagaa
gttccaccaccttatgacatgaaagcttattacgggaggagtgttgacttcagagaccca
tttgaaaaagaacgttatcgagaatgggagagaaaatatagagagtggtatgaaaaatat
tataaaggctatgctgctggagcacagcctagaccttcagcaaatagagagaacttttct
ccagagagatttttaccacttaatatcaggaattctcccttcacaagaggccgcagagag
gagtactctggtggacagagtcatagaagtcgaaacataggtggcaactatccagaaaag
ctttcatcaagagacagtcacaatcagaaggataatacaaagtcaaaagagaaggagagt
gaaaatgtttcaggagatggtaaaggaaataaacataagaaacacagaaaaagaagaaag
ggggaagaaagtgaaggctttctaaacccagagttattagaaacttctaggaaatcaaga
gagccaacaagtggtgaagaaaataaaacagactcattgtttgttctcccaagtagagat
gatgctacacctgttagagatgaaccaatggatgctgaatccattacttttaaatcagtg
tctgaaaaagacaagagagaaaaagataaacctaaagcaaaaggtgacaagaccaaacgg
aaaaatgatggatctgctgtgtccaaaaaagaaactgttgcaaaacctgctaaaggacct
caagaaaaactagatggagagcgtgaaaaatctcctcgatctgaacctccacttaaaaaa
gccaaagaggagactccaaagactgacaatgtgaaatcatcatcttcctctcaaaaagat
gaaaagatcattggtacccccagaaaagctcactctaagtcagtaaaggaacaccaggag
acaaaaccagtcaaagaggaaaaagtgaagaaggactactccaaagacgtcaagtcagag
aagctaactagtaaggaagaaaagaccaagaagcccaatgataagagtaaaccacttgat
agcaagggagaaaaaagaaaaagaaaaactgaagagaaaggtggagataaagattttgag
tcatcttcaatgaaaatctctaaattagaagtaactgaaatagtgaaaccatcaccaaag
cgcaaaatggaacttgatattgaaaagctggataggacgcctgaaaaagacaaaatttca
tcatcaactgctccagccaaaaaaatcaagcttaacagagaaactggtaaaaaaattgga
agtacagaaaatatatctaatacaaaagaaccctctgaaaaattggagtcaacatctggc
aaagttaaacaagaaaaaatcaaaggaaaggtcagacgaaaagtgactggaactgaagga
tccagctcaacactcgtggattataccagcaccagttcaactggaggcagtcctgtgcgg
aaatctgaagaaaaaacagatacaaagcgaactgtcattaaaacaatggaagaatataat
aatgataacacagctcctgctgaagatgttattattatgattcaggttcctcaatccaaa
tgggataaagatgactttgaatctgaagaagaagatgttaaatccaccacacagcctata
tcaagtgtaggaaaacctgccagtgttataaaaaatgttagcactaaaccatcaaatgca
gtcaaatatactgaaaaagaaaatgagtcgtcagagaaaattcagaaactcaccaaggaa
gtgagccatgaaattacacagcatgaggtcaaaagttcaaaaaactctgcatctagtgaa
aaagggaaaaccaaagatcgagatcattcagtgttggaaaaggaaaacccagaaaagagg
aagaacagcactcagccagagaaagatagtaatctggaccgtctgaatgagcaaggaaat
tttaaaagtctgtctcaatcttccaaagagactagaacttctggcaaagaagataagcat
gattccattcgaggttcctcaaataaagacttcactcccaacagagacaaaaaaactgat
tatgacaacagagagtattcaagttccaaacgtagagatgaaaggaatgaattaacaaga
agaaaagactctccttctcgcagtaaagactctgcagctggacaaaaaactaagccaagg
gaggagagagatttgcctaaaaaaggaacaggagattccaaaaaaagtaactctagtccc
tcaagagacaaaaaacctcatgatcataaatccacttatgatactaaacgttcaagtgaa
gagacgaaatctgtagataaaaatccctgtaaagatcgtgagaaacatgtgttagaggca
aagaacaataaagagtcaagtggcaataaatcactgtatatacttaacccgccggaccca
cagattgagaaggagcaagttactgggcaaattgataagaacaccatcaagcctaaaccc
cagttaagtcattcctctcgactgtcctctgacttaactagagaaactgatgaagctgct
tttgaaccagattacaatgaaagtgacagtgaaagcaatgtatctgtaaaagaggaagaa
acttcagggaaaatttctaaggaactgaaagataaagtaatggagaaagcaaaagagagc
ctggacatggcagcagtcagccaggtaggtgtaaccaggagccagagtcaaagcagccct
agtgtcagtccaagtagaagtcatagcccttctggaagccaaacccgaagccacagtagc
agtgctagctctgcagaaagtcaggacagcaagaagaagaagaaaaagaaagaaaagaaa
aagcacaagaaacataaaaaacataagaagcataagaaacatgcaggcactgaagtagaa
ttggaaaaaagccaaaaacacaaacataagaaaaagaagtcaaagaagagcaaagataaa
gaaaaggagaaggagaaagatgaccaaaaagtgaaatctgtcactgtgtaa
DBGET
integrated database retrieval system
