Orcinus orca (killer whale): 101277757
Help
Entry
101277757 CDS
T05247
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03040
Spliceosome
oor05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101277757
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101277757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101277757
03041 Spliceosome [BR:
oor03041
]
101277757
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101277757
mRNA cycle factors
Common to processing body (P body) and stress granule
101277757
Spliceosome [BR:
oor03041
]
Common components
Common spliceosomal components
hnRNP proteins
101277757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
101277757
NCBI-ProteinID:
XP_012388422
LinkDB
All DBs
Position
4:116194534..116195783
Genome browser
AA seq
373 aa
AA seq
DB search
MSKSESPKESQQLWKLFIRVFSFGTTSESLRSHFEQRGMLTDRVVMRDPNTKHSRGFGFV
TYAIVKEVDATMNARPHKVDGRVVEPKRAISREDSQRPGAHLTVKKIFAGGIKEDTEEHH
LRDYFEHLGKIEVIEIMTDQDSGKKRGFAFITFDDHDSIDKIVIQKYRTVNGHNCEVRKA
LSKQEMASTSSSQRGRSGSGNFGGVHXGDFGGNDNFGCEGDFGGQGGFGGSCDEGGYGGS
GDGYNGFGNDGGYRGGGPGYSGGNRGYGSDGQGYGNQGSGYGRSRSYDSYNNGGGRDSFG
SGSGSNFGGVRSYIDFGNYNNQSSNFGPMKGGNFGSRGSGPYGGGGQYFAKPQNQGGYCS
SSSSSSYGSGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtctcccaaagagtcccaacagctgtggaagctcttcatcagagtt
ttcagctttggaacaaccagtgagagtctgaggagccattttgagcaaaggggaatgctc
acagaccgtgtggtaatgagggatccaaacaccaagcactccagaggctttgggtttgtc
acatatgccattgtgaaggaggtagacgcaaccatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagagggccatctcaagagaagattctcaaagacctggtgcc
cacttaacagtgaaaaagatttttgctggtggcattaaagaagacactgaagaacatcac
ctaagagattattttgaacatttgggaaaaattgaagtgattgaaatcatgacagaccaa
gacagtggcaaaaagagaggatttgctttcataacttttgatgaccatgactctatagac
aagattgtcattcagaaataccgcacagtgaatggccataactgtgaagtaaggaaagcc
ctttcaaagcaagagatggctagtacttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtgttcactgaggtgattttggtgggaatgacaactttggttgtgaagga
gacttcggtggtcaaggtggctttggtggcagctgtgatgaaggtggatatggtggcagt
ggggatggctataatggatttggtaatgatggtggttatagaggaggtggccctggttac
tctggaggaaacagaggctatggaagtgatggacagggttatggaaaccagggcagtggc
tatggaaggagcagaagctatgacagctataacaatggaggaggcagagacagctttggt
agtggtagtggaagtaattttggaggtgtcagaagctacattgattttggcaattacaac
aatcaatcttcaaattttggacccatgaaaggaggaaactttggaagcagaggttctggc
ccctatggtggtggaggccaatactttgccaaaccacaaaaccaaggcggctattgcagt
tccagcagcagcagcagctatgggagtggcagaaggttttaa
DBGET
integrated database retrieval system
