Orcinus orca (killer whale): 101277860
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Entry
101277860 CDS
T05247
Symbol
IRF8
Name
(RefSeq) interferon regulatory factor 8 isoform X2
KO
K10155
interferon regulatory factor 8
Organism
oor
Orcinus orca (killer whale)
Pathway
oor05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05133 Pertussis
101277860 (IRF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101277860 (IRF8)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
101277860 (IRF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
101277860
NCBI-ProteinID:
XP_004280125
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Position
20:complement(3224129..3246212)
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AA seq
426 aa
AA seq
DB search
MCDRNGGRRLRQWLIEQIDSTMYPGLIWENDEKSMFRIPWKHAGKQDYNQEVDASIFKAW
AVFKGKFKEGDKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKC
KLGVVAPGCISEATEMECGRSEIDELIKEPPVDDYMGMVKRSPSPPEACRSQLLPDWWMQ
QPSAGLPLVPGYSTYDAHHAAFSQMVISFYYGGKLMGQTTTTCPEGCRLSLGQPGLPGGK
LCGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLLHSSRQGVLVKRQCQGRVFYS
GNAAVGRGGPNKLERDEVVKVFDTSQFFRELQQFYNSQSRLPDSRVVLCFGEEFPDMTPL
RSKLILVQVEQLYIRQLVEEAGKSCSAGSVMQAPEEPLPDQVFRMFPDICASHQRPFFRE
NQQITV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaccgcaacggcggccggcggctgcggcaatggctgattgagcagatcgacagt
accatgtacccagggctgatctgggagaacgacgagaagagcatgttccggatcccttgg
aaacacgccggcaaacaggattacaaccaggaagtggacgcctccatcttcaaggcctgg
gccgtttttaaagggaagtttaaggaaggggacaaggccgagccggccacatggaagacg
aggttacgctgtgctttgaacaagagcccggattttgaggaagtgacagaccggtcccag
ctggacatttctgaaccgtataaagtttaccgaatcgtccccgaggaggagcaaaaatgc
aagttaggcgtggtggctcccggttgcattagtgaagccacagagatggagtgcggtcgc
tccgaaatcgacgagctgatcaaggagcctcccgtggacgattacatggggatggtcaaa
aggagcccctccccgcccgaggcctgcaggagtcagctcctcccggactggtggatgcag
cagcccagcgcaggcctgccgctggtgccagggtacagcacctacgacgcgcaccacgca
gccttctcccagatggtcatcagcttctactacgggggcaagctgatgggccagaccacc
accacgtgccccgagggctgccgcctgtccctgggccagcccggcctgcccggcggcaag
ctgtgtgggcccgagggcctggagctggtgcgcttcccgccggccgacgccatccccagt
gagcggcagcggcaggtgacgcggaagctgttcgggcacctggagcgcggcgtcctcctg
cacagcagccggcagggcgtgctggtcaagcggcagtgccagggccgcgtgttctacagc
ggcaacgccgcggtgggcaggggcggccccaacaagctggagcgcgacgaggtggtcaag
gtcttcgacaccagccagttcttccgagagctgcagcagttctacaacagccagagccgg
cttcccgacagcagggtggtgctgtgcttcggagaggagtttccagatatgaccccgttg
cgctccaagctcattctcgtgcaggtcgagcagctctacatccgacagctggtggaagag
gctgggaagagctgcagcgccggctccgtgatgcaggctcccgaggagcccctgccagac
caggtcttccgcatgtttccagatatttgcgcctcacaccagagaccttttttcagagaa
aaccaacagatcacagtttaa
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