Orcinus orca (killer whale): 101277894
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Entry
101277894 CDS
T05247
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101277894 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101277894 (LSM1)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101277894 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
101277894 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
101277894
NCBI-ProteinID:
XP_004284929
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All DBs
Position
21:5847191..5856849
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcccggcaccgccagcctcatcgaggacatcgacaaaaagcacttggtc
ctgcttcgagatggaaggacacttataggctttttaagaagcattgatcaatttgctaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttagaa
aaggagagtgacacacccctccagcaagtgtctattgaagaaatcctagaagaacagagg
gtggaacagcagaccaagctggaagctgagaagttgaaagtccaggccctgaaggatcga
ggcctgtctatccctcgagcagatactcttgatgagtattaa
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integrated database retrieval system
