Orcinus orca (killer whale): 101278146
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Entry
101278146 CDS
T05247
Symbol
TMC4
Name
(RefSeq) transmembrane channel-like protein 4 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
101278146 (TMC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oor02000
]
101278146 (TMC4)
03037 Cilium and associated proteins [BR:
oor03037
]
101278146 (TMC4)
Transporters [BR:
oor02000
]
Other transporters
Pores ion channels [TC:
1
]
101278146 (TMC4)
Cilium and associated proteins [BR:
oor03037
]
Other cilia and associated proteins
Stereociliary proteins
101278146 (TMC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
101278146
NCBI-ProteinID:
XP_012394474
LinkDB
All DBs
Position
20:complement(55176017..55190647)
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AA seq
778 aa
AA seq
DB search
MCYHPSPGEPRRHLWTSAPRRPFGAEALIVYGKCRVFPPGHLAARFAPVSGSSLTWGSPC
SAGPRDGNRSAAGAIEESPMWEQEAWASSGGWPAPRETRTGPLLSSVLNELPSAATLRYR
GPGVLPWGALEEEEDGQRSIQSVAEATQKELQEPGPSRELPWPMQARRAHRQGLARNQVA
QGSGSRATHWTLLLRRSKEKVREGLRSVQPWDWTLKRIGGQFGAGTESYFSLLRFLLLLN
VLASVLTACMILLPTWLEGAPPGPPAPNASSPCGSYMPGSQSLVTFSTHLFNFLSGEGFL
EWSPLFYGFYPPRPHLAITYLCSTFAICLLYLLLILHRSVSGLKQTLLAESGAVTSYSHR
VFSAWDFGLSGEVHVRLRQRNILFELQVELEEAAVRRQAAVRTLGQQARVWSVRLLLNMA
VLALLGAAFYGVYWATGATVELQEMPLIQGMPLLKLVVDYLPSIFISGVNFVLPPVFKLI
APLEGYTRSRQIVFILLRTVFLRLTSLLVLLISLWNQITCGGDADAEECKTCGYNYKELP
CWETRLGQEMYKLLLFDLLTGLAVTLLIQFPRKLLCGLCPGALGRFAGTLEFQVPDEVLG
LIYAQTVVWVGSFFCPLLPLLNTAKFLLLFYLKKITLFSTCSPASRTFRASTVNFFFPLV
LLLGLAISTVPVLYSIFLIPPSKLCGPFRGQSSIWAEIPESICKLPQTAQKFLFFLGTQA
FAVPLLLISSILMAYTVALANSYGRLISELKRQIETEAQNKVFLAQRAVALSSANRAL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtgctaccacccatcccccggggagccacgcaggcatctgtggacttcagctcccagg
agacctttcggagcagaggccctgatagtttatgggaagtgccgggtatttcctccgggc
cacctggcggccaggtttgcccctgtctcaggctcctccctcacctggggcagtccctgc
tctgctggtcctagagacgggaacagatccgcggctggggccattgaagagagcccgatg
tgggaacaggaggcctgggcctcctctgggggatggccggcaccccgggagaccagaaca
ggtccattgctgtcctccgtgcttaatgagctccccagtgctgctacccttcggtaccga
ggccctggggtgctgccctggggggccctggaggaggaggaggacggacagaggagcatc
cagtccgttgcagaagccacacaaaaggagctgcaggagcctggcccttcccgggaactg
ccgtggcccatgcaggccagacgggcacacagacagggccttgccaggaaccaagtggct
cagggctcggggtccagggccacccactggactcttctgcttcggaggtccaaggagaag
gtgcgggaaggcctgcgctccgtgcagccctgggattggacgctgaagaggattgggggc
cagtttggcgccggcaccgagtcctacttctccctgctgcgcttcctgctgcttctcaac
gtgctggcctccgtgcttacagcctgcatgattctgctgcccacctggttggaaggggct
ccccctggtccccctgcccctaacgcctcctcaccctgcggctcctacatgcccggctct
cagagcctggtcaccttctccacccatctcttcaatttcctctccggagagggttttcta
gaatggtctcctctcttctatgggttctacccgccccgcccacacctggccatcacctac
ctgtgctccacctttgccatttgcctcctctacctgctgctcatcctgcaccgctcggtg
tctgggctgaagcagacgctgttggctgagtcaggggccgtgaccagctacagccaccgc
gtgttctccgcctgggactttggcctcagcggggaggtccacgtgcggctgcgccagcgc
aacatcctatttgagttgcaggtggagctggaggaagcagcggtgcggcgccaggctgcg
gtgcggacgctgggccaacaagccagggtgtggtcggtgcggttgctgctcaacatggcg
gtgttggcactcctgggggcagccttctacggcgtctactgggccacaggggccactgtg
gagctgcaggagatgcctcttatccagggaatgccactgctgaagctcgtggtggattac
cttccgtccatcttcatctccggggtcaacttcgtgctgccaccggtgttcaagctcatt
gccccactggagggctacaccaggagccgccagatcgtttttatcctgctcaggacagtg
tttctccgcctgacctccctgctggtcctgctcatctctctctggaatcagatcacttgc
gggggagatgcggacgctgaggagtgcaaaacctgtggctacaattacaaagaacttccg
tgctgggagactcgcctgggacaggagatgtacaaactcctgctgtttgatctcctgacc
ggcctggcagtcacgctgctcatccagtttcctcggaagctgctgtgtggcctctgtccc
ggggcgctgggtcgttttgcggggaccctggagttccaggtgcctgacgaagtgctgggg
ctcatctacgcacagacagtggtctgggtggggagttttttctgccctttactgcctttg
ctcaacacggccaagttcctgctgcttttctatttgaagaagatcaccctcttctccacc
tgctccccggcctcccgcacctttcgggcctccactgtgaacttcttcttccccctggtc
cttctcctgggtctggccatctccaccgttcctgtgctttatagcatcttcctgatccca
ccttctaagctgtgtggtccattccgggggcagtcgtccatctgggccgagatccccgag
tctatttgcaagctccctcagactgcccagaaatttctcttcttcctggggacccaggct
tttgctgtgccccttctgctgatctccagcatcctgatggcgtataccgtggccctggct
aactcatacggacgcctcatctctgaactcaaacgccagatagagacggaggcgcagaat
aaagtcttcctggcacagcgcgctgtggcgctgagctcggccaacagagctctttga
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