Orcinus orca (killer whale): 101278319
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Entry
101278319 CDS
T05247
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator isoform X1
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor02010
ABC transporters
oor04024
cAMP signaling pathway
oor04152
AMPK signaling pathway
oor04530
Tight junction
oor04971
Gastric acid secretion
oor04972
Pancreatic secretion
oor04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101278319 (CFTR)
09132 Signal transduction
04024 cAMP signaling pathway
101278319 (CFTR)
04152 AMPK signaling pathway
101278319 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101278319 (CFTR)
09150 Organismal Systems
09154 Digestive system
04971 Gastric acid secretion
101278319 (CFTR)
04972 Pancreatic secretion
101278319 (CFTR)
04976 Bile secretion
101278319 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oor02000
]
101278319 (CFTR)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
101278319 (CFTR)
Transporters [BR:
oor02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
101278319 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
T2SSE
DO-GTPase2
AAA_16
DUF87
RsgA_GTPase
Zeta_toxin
MeaB
NTPase_1
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
101278319
NCBI-ProteinID:
XP_004269898
LinkDB
All DBs
Position
9:complement(31853118..32049559)
Genome browser
AA seq
1482 aa
AA seq
DB search
MQRSPLEKASVFSQLFFSWTRPILRKGYRKRLELSDIYHISSSDSADNLSEKLEREWDRE
LASKKNPKLINALRRCFFWRFMFYGIILYLGEVTKAVQPLLLGRIIASYDPDNKVERAIA
IYLGIGLCLLFIVRMLLLHPAIFGLHRIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQL
VSLLSNNVNKFDEGLALAHFVWIAPLQVTLLMGLLWELLQAWAFCGLAFLIVLALFQAGL
GKMLMKYRDQRAGKINERLVITSEMIENIQSVKAYCWEEAMEKIIENLRQTELKLTRKAA
YVRYLNSSAFFFSGFFVVFLSVFPYALLNGIGLRKIFTTISFCIVLRMAVTRQFPWAVQT
WYDSLGAINKIQDFLQKQEYKTLEYNLTTTEVVMENVTAFWEEGFGKLFEKAKQNNNNRK
ISNGDNSLFFSNFSLLGAPVLKDISFNIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEG
KIKHSGRISFCSQFSWIMPGTIKDNIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIV
LGDGGITLSGGQQARISLARAVYRDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTR
ILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNQRPDFSSKLMGYDTFDQFTAERRNS
IITETLRRFSLEGDTSVSWNETKKQSFKQTGEFGEKRKNSILNSISSMRKFSFVQKTPLQ
MNGIEDDSVEPSERRLSLVSGSELGEAILPRSNMIDAGPTFQGRRRQSVLNLMTRSSVNQ
GQSIQRKTATSTRKMSLAPQANLTEIDIYSRRLSEDTGFEISEEINEEDLRECFFDDVEN
IPAVTTWNTYLRYITVRKSLLFVLIWCLVIFLAEVAASLVLLWLLPKVLPQDKGNSTKSA
NNSYAVIITNTSSYYVFYIYVGVADTLLALGLFRGLPLVHALIRVSKILHHKMLQSVLQA
PMSTLNTLKAGGILNRFSKDIAVLDDLLPLTIFDFIQLLLIVIGAMAVVSVLQPYIFLAT
VPVIAAFILLRGYFLCTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFH
KALNLHTANWFLYLSTLRWFQMRIELIFVLFFIAVTFISILTTGEGEGTAGIILTLAMNI
MGTLQWAVNSSIDVDSLMRSVSRVFKFIDMPAEDGKPNKSLKPSKDGQLSKVMIIENHHV
KKDDIWPSGGRMTVKDLTVKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFL
RLLNTKGEIQIDGVSWDSVTLQQWRKAFGVLPQKVFIFYGTFRKNLDPYGQWSDQEIWKV
ADEVGLRSVIEQFPGKLDFVLMDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDP
ITYQIIRRTLKQAFADCTVILSEHRIEAMLECQRFLVIEENRVRQYDSIQRMLSEKSLFR
QAISPTVRLKLFPHRNSSKQTSRSKIAALKEETEEEVQETRL
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtcgcctctggaaaaggccagcgtcttctcccaactttttttcagctggacc
agaccaattttgaggaaagggtacagaaagcgcctggaattgtcagacatataccatatc
tcttcttctgattctgctgacaatctatctgaaaaattggaaagagaatgggatagagaa
ctggcctcgaagaaaaatcccaaactcattaatgcccttcggcgatgctttttctggaga
tttatgttctatggaatcatattatatttaggggaagtcaccaaagcagtacagcctctc
ttactgggaagaatcattgcttcctatgatccagataacaaggtagaacgcgccattgcg
atttacctaggcataggcttatgccttctctttatcgtgaggatgctgctccttcaccca
gccatttttggcctccatcgcattggaatgcagatgagaatagctatgtttagtttgatt
tataagaagactttgaagctgtcaagccgtgttctagataaaataagtattggacaactt
gttagtctcctttccaacaacgtgaacaaatttgatgaaggacttgcactggcacatttc
gtgtggattgctcctttgcaagtgacgctgctgatggggctgctctgggagttgttacag
gcctgggccttctgtggacttgcttttctcatagtccttgccctttttcaagccggatta
gggaaaatgctgatgaagtacagagatcagagagctggaaagattaatgaaagactggtg
atcacatcagaaatgattgaaaatatccagtcggttaaggcctactgctgggaagaagca
atggaaaaaataattgaaaacctaagacaaacagaactgaaactgacccggaaggcagcc
tatgtgagatacctcaatagctcagccttcttcttctcagggttctttgtagtgttttta
tctgtgtttccttatgcactgcttaatggaatcggccttcgaaaaatattcacaaccatc
tcattctgcatcgttctgcgcatggcagtcactcggcagttcccctgggctgtacaaact
tggtatgattctcttggagcaataaacaaaatacaggatttcttacaaaagcaagaatat
aagacactggaatataacttaacaactacagaagtagtgatggagaatgtaacagccttc
tgggaggagggatttgggaaattatttgagaaagcaaaacaaaataataacaatagaaaa
atttccaatggtgataacagcctcttcttcagtaacttctcacttctcggtgctcctgtc
ctgaaagatatcagtttcaatatagaaagaggacagttgttggccgtcgctggatctact
ggagcaggcaagacttcacttctcatgatgattatgggagaactggagccttcagagggt
aaaattaagcacagtggaagaatttcattctgctctcagttttcctggatcatgcctggc
accattaaagataacatcatctttggtgtttcctatgatgagtatagatataggagtgtc
atcaaagcatgccaactagaagaggacatctccaaatttgcagagaaagacaacatagtt
cttggagatggtggaatcacattgagtggaggtcagcaagcaagaatttctttagcaaga
gcagtatacagagatgctgatttgtacctattagactctccctttggatacctagatgtg
ttaacagaaaaagaaatatttgaaagctgtgtctgtaaattgatggctaacaaaactagg
attttggtcacttctaaaatggaacatttaaagaaagctgacaaaatattaattttacat
gaaggtagcagctatttttatgggacattttctgaattacaaaatcaacggcccgacttc
agctcaaagctcatgggatatgacacttttgaccagtttactgcagaacgaagaaattca
atcataactgagactttacggcgtttctcactagaaggagatacttctgtgtcctggaat
gaaacgaaaaagcaatcttttaaacagactggagagtttggtgaaaaaaggaagaactcc
attctcaattcaatcagctctatgaggaaattttcatttgtacagaagactccattacaa
atgaatggcatcgaagacgattctgttgagccttcagagagaagactatccttagtttcc
ggttctgaactgggagaggctatcctgcctcggagcaacatgatcgatgctggtcccaca
tttcagggacgaaggaggcagtcagtcctgaaccttatgacccgctcctcggtgaaccaa
ggtcaaagcattcagcgaaagacagcgacatccacacgaaaaatgtcactggcccctcag
gcgaatttaactgaaatagatatatattcaagacggttatctgaagatactggctttgaa
ataagtgaagaaattaatgaagaagatttaagggagtgcttttttgatgatgtggagaac
ataccagcagtgactacatggaacacataccttcgatatattactgtccgcaagagctta
ctttttgtgctaatttggtgcttagtcatttttctggctgaggtggctgcttctttggtt
ctgttgtggctgcttccaaaagtacttcctcaagacaaagggaatagtactaagagtgca
aataacagttatgcagtgatcatcaccaacaccagctcgtattatgttttttacatttat
gtgggagtagctgacactttgcttgctctgggactcttcagaggtttaccactggtgcat
gctttaatcagagtgtcaaaaatactacaccacaaaatgttacagtctgttcttcaagcc
cctatgtcaaccctcaacacgttgaaagcaggtgggattcttaatagattctccaaagat
atagcagttttggatgatcttctgcctcttaccatatttgacttcattcagttgttatta
attgtgattggggctatggcggtagtctcagttttacaaccctacatcttcctagctaca
gtgccagtgatagcggcttttattctattgagaggctacttcctctgcacctcacagcaa
ctcaaacagctggaatctgaaggcagaagtccaattttcactcatcttgttacgagctta
aaaggactatggacacttcgtgcctttggacggcagccttactttgaaactttgttccac
aaagctctgaatttacatactgccaactggttcttgtatctatcaacactgcgctggttc
caaatgagaatagaattgatttttgtcctcttcttcattgctgttaccttcatttccatt
ttaacaacaggtgaaggagaaggaacagctgggattattctaactttagccatgaatatc
atgggtacactacagtgggccgtaaactctagcatagatgtggatagcttgatgcgatct
gtgagccgagtctttaagtttattgatatgccagcagaagatggtaaacctaacaagtca
ctgaaaccatccaaggatggccagctctcaaaagttatgattatcgagaatcatcatgtg
aagaaagatgacatctggccctcagggggccgaatgaccgtgaaagacctcacagtgaag
tatatagacggtgggaatgccatattagagaacatttccttctcaataagtcctggccag
agggtgggcctcttgggaagaactggatcagggaagagcactttgttactggcttttttg
agactgctgaacaccaaaggagaaatccagatagatggtgtgtcttgggattcagtaact
ttgcaacagtggaggaaagcctttggagtcctaccacagaaagtattcatcttttatggc
acatttagaaaaaacctggatccttatgggcagtggagtgatcaagaaatatggaaagtt
gctgatgaggttggactcagatctgtgatagagcagtttcctgggaagcttgattttgtc
cttatggatgggggttgtgtcctaagccatggccacaagcagctgatgtgcttggccaga
tccgttctcagtaaagcaaagatcttgctgcttgatgaacccagtgctcatctggatcca
ataacataccagatcattcgaagaaccctaaaacaagcatttgctgattgcacagtaatc
ctctctgaacacaggatagaggcaatgttggaatgtcagcgatttttggtcatagaggag
aatagagtgcggcagtacgactccatccagaggatgctgagcgagaagagcctcttccgg
caggcgatcagccccacagtccgcttgaagctcttcccccaccggaactcgagcaagcag
acgtctcggtccaaaatcgctgccctgaaggaggagacggaagaagaggtacaagaaaca
aggctttag
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integrated database retrieval system
