Orcinus orca (killer whale): 101278471
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Entry
101278471 CDS
T05247
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03030
DNA replication
oor03410
Base excision repair
oor03420
Nucleotide excision repair
oor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101278471 (RFC2)
03410 Base excision repair
101278471 (RFC2)
03420 Nucleotide excision repair
101278471 (RFC2)
03430 Mismatch repair
101278471 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oor03032
]
101278471 (RFC2)
03036 Chromosome and associated proteins [BR:
oor03036
]
101278471 (RFC2)
03400 DNA repair and recombination proteins [BR:
oor03400
]
101278471 (RFC2)
DNA replication proteins [BR:
oor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101278471 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
101278471 (RFC2)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101278471 (RFC2)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101278471 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
101278471 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Viral_helicase1
AAA_24
AAA_11
Rad17
Mg_chelatase
RuvB_N
nSTAND3
AAA_19
RCF1-5-like_lid
AAA_assoc_2
MipZ
AAA_28
AAA_18
AAA_5
AAA_23
AAA_30
DNAX_ATPase_lid
NTPase_1
ABC_tran
AAA_25
RNA_helicase
SLFN-g3_helicase
MeaB
Motif
Other DBs
NCBI-GeneID:
101278471
NCBI-ProteinID:
XP_004268826
LinkDB
All DBs
Position
16:78235048..78257001
Genome browser
AA seq
352 aa
AA seq
DB search
MDAQESGGGSGECGAQDPDPAPSKAPGSAGQYELPWVEKYRPVKLNEIVGNEDTVSRLEV
FSREGNVPNIIISGPPGTGKTTSILCLARALLGPAFKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQILARLLCVIEQEKVPHTDDGLEAILFTAQGDMRQALNNLQSTFAG
FGFINSENVFKVCDEPHPLLVKEMIQHCVSASIDEAYKILAHLWHLGYSPEDIIGNIFRV
CKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcaggagagtggcggtggcagtggcgagtgcggggcccaggaccctgatccg
gcccccagcaaggcccccggcagtgccggccagtacgagctgccgtgggttgaaaaatat
agaccagtaaagctgaatgaaattgtcgggaatgaagacacagtgagcaggctggaggtc
ttttcaagagaagggaatgtgcccaatatcatcatttctggccccccaggaaccggcaaa
actaccagcatcctgtgtttggcacgagccctgctgggcccggccttcaaggatgccgtt
ttggagctcaatgcctcaaatgacaggggcattgacgttgtgaggaacaaaatcaaaatg
tttgcccaacagaaagtcacccttcccaaagggcgacacaagatcatcatcctggatgaa
gcagacagcatgactgatggagcccagcaagccttgaggagaacgatggaaatctactcc
aaaacgacccgcttcgctcttgcttgtaacgcttcggataaaatcatagagcccattcag
tcccggtgcgcggtcctccgctacaccaagctgaccgacgcccagattcttgccaggctg
ctttgcgtcatcgagcaggagaaggtgccgcacacggacgacggcctggaagccatcctc
ttcaccgcccagggcgacatgaggcaggcgttgaacaacttgcagtccactttcgcggga
ttcggcttcatcaacagtgagaacgtgttcaaggtctgtgacgagccccaccccttgctg
gtgaaggagatgatccagcactgtgtgagcgccagtatcgatgaggcctacaagatcctc
gctcacctgtggcatcttggctattccccagaagacatcattggcaacatttttcgagtg
tgtaaaaccttccaaatggcagaatacttgaaactggagtttattaaggaaattggatac
actcatatgaaaatagcggaaggtgtgaactcccttctgcagatggcagggctcctggcc
aggctgtgtcagaagacaatggccccagtggccagttag
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integrated database retrieval system
