KEGG   Orcinus orca (killer whale): 101278717
Entry
101278717         CDS       T05247                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04115  p53 signaling pathway
oor04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101278717 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    101278717 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oor04121]
    101278717 (COP1)
Enzymes [BR:oor01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101278717 (COP1)
Ubiquitin system [BR:oor04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101278717 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101278717 (COP1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 zf-C3HC4_2 Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 zf-RING_2 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 zf-RING_UBOX Beta-prop_EML zf-C3HC4_3 Beta-prop_DCAF4 zf-RING_5 zf-C3HC4_4 Beta-prop_WDR90_POC16_2nd RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 zf_C2H2_10 zf-RING_11 Sina_RING
Other DBs
NCBI-GeneID: 101278717
NCBI-ProteinID: XP_004269836
LinkDB
Position
1:54870835..55161461
AA seq 735 aa
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALGSGGAAQAAGSGG
LGGPVRPVLVAAAVSGSGGGSGGGAVSAGLSRLSCAARPSAGVGGSSSSLGSGSRKRPLL
APLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV
VDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLA
NVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV
EEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASR
RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASD
LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI
SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA
KVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFK
GHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIA
CGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVL
IAANSQGTIKVLELV
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgtctgggagccgccaggccgggtcgggctcagccgggaccagccctggctcctctgcg
gcctcctcggtgacttccgcctcctcgtccttatcctcttccccgtcgcccccttccgta
gctgcttcggccgcggcgctggggtccggcggggcggcccaggccgcgggctccggcggc
ctcgggggcccggtgcggcctgtgctggtggcggccgcagtgtccggcagtggcggcggg
agcggcggcggggcggtgtccgcgggcctgtcccggctcagctgcgcagccaggcccagc
gccggcgtaggagggagcagctccagcctagggagcggcagcaggaagcgacctctgctt
gcccccctgtgcaacgggctcatcaactcctacgaggacaaaagcaacgacttcgtctgc
cctatctgctttgatatgattgaggaagcatacatgacgaagtgtggccacagcttttgc
tacaagtgtattcatcagagtttggaggacaataatagatgtcccaagtgtaactatgtt
gtggataatattgaccatctgtatcctaatttcttggtgaatgagctcattctcaaacag
aagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggc
cacaggtggcaaatatttcaggatttgttgggaactgaccaagataatcttgatttggcc
aatgtcaacctcatgttggagttactagtgcagaagaagaaacaactggaagcagaatca
catgcagcccaactacagatccttatggaattcctcaaggttgcaagaagaaataagaga
gagcaactggagcagattcagaaggagttaagtgttttggaagaggatatcaaaagagtg
gaagaaatgagcggcttatactctcctgtcagtgaggatagcacagtgcctcaatttgaa
gctccttctccatcacacagtagtattattgattccacagaatacagccaacctccaggt
ttcagtggcagttctcagacaaagaaacagccctggtataacagcacattagcatcaaga
cgaaaacgactcactgctcattttgaagacttagagcaatgttacttttctacaaggatg
tctcgtatctcagatgacagtcgaactgcaagccagttggatgaatttcaggaatgcttg
tccaagtttactcgatataattcagtacgacctttggctacattatcatatgctagtgat
ctctataatggttccagcatagtttctagtattgaatttgaccgggattgtgactacttt
gcaattgctggggttacaaagaagattaaagtctatgaatatggcacagtcattcaggat
gcggtggatattcattaccctgaaaatgaaatgacctgcaattccaaaatcagctgtatc
agttggagtagttaccataagaacctgttagccagcagtgattatgaaggcaccgtcatc
ctatgggatggattcacaggacagaggtcaaaggtctatcaggagcatgagaaaaggtgt
tggagtgttgactttaatttgatggatcctaaactcttggcttcgggttctgatgatgca
aaagtgaagctatggtctaccaacctagacaactcggtggcaagcattgaggcgaaggct
aacgtgtgctgtgttaaattcagcccctcttctagataccatctggctttcggctgtgca
gatcactgtgttcactactatgatcttcgtaacactaaacagccaatcatggtattcaaa
ggacaccgaaaagcagtctcttatgcaaagtttgtgagtggtgaggaaattgtctctgct
tcaacagacagccagctaaagctgtggaatgtagggaagccatactgtctacgttccttc
aagggtcacatcaatgaaaaaaactttgtaggcctcgcttccaatggagattatatagct
tgtggaagtgagaacaactctctttacctgtactataaaggactttctaagactttgcta
acttttaagtttgatacggtgaaaagtgttctggacaaagaccgaaaagaagatgataca
aatgagttcgttagtgctgtgtgctggagggcactgccagatggggagtccaatgtgctg
attgctgctaacagtcagggtacaattaaggtgctagagttggtatga

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