Orcinus orca (killer whale): 101278758
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Entry
101278758 CDS
T05247
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X3
KO
K17890
autophagy-related protein 16-1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04136
Autophagy - other
oor04140
Autophagy - animal
oor04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101278758 (ATG16L1)
04136 Autophagy - other
101278758 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101278758 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101278758 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
oor03029
]
101278758 (ATG16L1)
Membrane trafficking [BR:
oor04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
101278758 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
101278758 (ATG16L1)
Mitochondrial biogenesis [BR:
oor03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101278758 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
101278758
NCBI-ProteinID:
XP_004262620
LinkDB
All DBs
Position
7:113924679..113971414
Genome browser
AA seq
587 aa
AA seq
DB search
MSGLRASVFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEKH
DIPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQKD
KEMQMNEAKIAECLQTISDLETECLELRTKLQDLERANQTLKDEYDALQITFTALEEKLR
KTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPAEQDDDIE
VLVDETSDHAEEASPVRAVSRAAARRSVSSFPVPQDNVDTHPGSSKEVRVPTTAMCVFDA
HDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSY
LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK
VCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPER
TELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYI
WSVLSGKVEKVLSKHHSSAINAVAWSPAGSHVVSVDKGSKAVLWSEY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcctccgcgcctccgtcttcccccgctggaagcgccacatctcggaggagttg
aggcgccgggaccggctgcagaggcaggcgttcgaagagatcatcctgcagtataacaag
ttgctggaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaagcat
gacataccaaacaggcatgagataagtcctggacatgatggtgcatggaatgatagtcag
ctgcaagaaatggcccagctgaggattaaacaccaagaagaactgactgaattacacaag
aaacgtggggagttagctcagttggtgattgacctgaataaccaaatgcagcagaaggac
aaggagatgcagatgaatgaagccaaaattgcagaatgcttgcagaccatctctgatctc
gagaccgagtgcctggaactacgcactaagcttcaggaccttgaaagagccaaccagacc
ctgaaggatgaatatgatgccctgcagatcactttcactgccctggaggagaaactgagg
aagactactgaggagaaccaggagctggtcaccagatggatggctgagaaagcccaggaa
gctaatcgcttaaatgcggagaatgagaaggattcgaggaggcggcaagcccggctgcag
aaggagctcgcagaagcagcaaaggaacctctcccagctgagcaggatgatgacattgaa
gtccttgtggatgaaacctccgatcacgctgaggaggcctctccggtgcgggccgtcagc
agagcagccgcgaggcgctctgtgtcttcctttccagttccccaggataacgtggatact
catcctggctctagtaaagaagtgagggtgccaacgactgcaatgtgtgtcttcgacgct
catgatggggaggtcaatgctgtgcagttcagtccgggttcccggctcctggccacggga
ggcatggatcggagggtgaagctctgggaagtgttcggagacaaatgtgagttcaagggc
tccctgtccggcagtaatgcaggaattacaagcattgaattcgatagtgctggatcttac
ctcttagcagcgtcaaatgattttgcaagccgcatctggactgtggatgactatcggtta
cggcatacactcacgggacacagcggcaaagtgctgtctgccaagttcctgctggacaat
gcgcgtattgtttctggaagtcacgaccggaccctcaaactctgggatctacgcagcaaa
gtctgcataaagacggtatttgccggatccagctgcaatgatattgtctgcacagagcag
tgtgtgatgagtggacattttgacaagaaaattcgtttctgggacatccgatcagagagt
attgtccgagagatggagctcttgggaaagattactgccctggacttaaacccagaaaga
actgaactcctcagctgctcccgagatgacctgctaaaaattattgacctacgaataaat
gccgtcagacagacattcagcgcgccgggcttcaagtgcggctccgactggacgagagtt
gtgttcagccctgacggcagttacgtggcagcaggctcggccgagggctccctctacatc
tggagcgtgctctccgggaaagtggagaaggtcctttcaaagcatcacagctcagcgatc
aacgccgtggcctggtcgcctgccggctcccatgtcgtcagcgtggacaaaggaagcaaa
gctgtgctgtggtcagagtactga
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