KEGG   Orcinus orca (killer whale): 101279066
Entry
101279066         CDS       T05247                                 
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
  KO
K17908  autophagy-related protein 18
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04136  Autophagy - other
oor04140  Autophagy - animal
oor05010  Alzheimer disease
oor05014  Amyotrophic lateral sclerosis
oor05016  Huntington disease
oor05017  Spinocerebellar ataxia
oor05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:oor00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101279066 (WIPI1)
   04136 Autophagy - other
    101279066 (WIPI1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101279066 (WIPI1)
   05014 Amyotrophic lateral sclerosis
    101279066 (WIPI1)
   05016 Huntington disease
    101279066 (WIPI1)
   05017 Spinocerebellar ataxia
    101279066 (WIPI1)
   05022 Pathways of neurodegeneration - multiple diseases
    101279066 (WIPI1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oor04131]
    101279066 (WIPI1)
   03029 Mitochondrial biogenesis [BR:oor03029]
    101279066 (WIPI1)
Membrane trafficking [BR:oor04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    101279066 (WIPI1)
Mitochondrial biogenesis [BR:oor03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    101279066 (WIPI1)
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_WDR19_1st ANAPC4_WD40 WDR55 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_NWD2_C EIF3I DUF5711 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N BCAS3_WD40 RMC1_N Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 101279066
NCBI-ProteinID: XP_004275463
LinkDB
Position
19:complement(23439524..23477001)
AA seq 502 aa
MEAGAADGPSGGVEEALSCFSFNQDCTSLAIGTKSGYKLFSLSSVEQLDPVHGSNDIPDV
CIVERLFSSSLVVVVSHAKPRQMNVYHFKKGTEICSYSYSSNVLSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTILDIPPNPTGLCALSINHSNSYVAYPGSRTTGEIVLYDGHALKTVC
TIAAHEGALAAIAFNASGSRLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLAF
SMDSQLLCASSNTETVHIFKLEHLANSQPEEPSTWTGYMGKMLMAATNYLPTQVSDMMNQ
DRAFATGRLGFSGHRNICTLSTIQKLPRLLVASSSGHLYIYSLDPQDGGDCVLIKTHSLL
GSGTADENKENDLRASLPQSYAATVARPSPSAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPKEGFLPVRVPITERASPERSLGPSNFGAAPVCGASGRGLGDHQTPALPS
CLQAERWGSRWASASQCTRIGA
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggaggccggggccgcggatggcccctcgggcggggtcgaggaggcgctcagctgcttc
tctttcaaccaggactgcacatccctcgcgattggaaccaaatctggttataagctgttt
tctttgagctccgtggagcagctggaccccgtccacggaagcaatgacatccccgacgtc
tgcatcgtggagcgcctcttctccagcagcctggtggtggtggtgagccacgcgaagcct
cgtcagatgaacgtctaccacttcaagaagggcacggagatctgcagctacagctactcc
agcaacgtcttgtccatcaggctgaaccggcagaggctgctcgtctgcctggaggagtcc
atttacattcacaacattaaagacatgaagcttctgaagaccatcctggatattcctcca
aacccgacaggtctgtgtgccctgtccatcaaccattccaattcctacgtggcctatcct
gggagccggacgacaggcgagatcgtgctctacgacggacacgccctgaagacagtctgc
accattgctgcccacgagggggcgctggccgccattgccttcaacgcctcgggctccaga
ctggccagcgcctccgagaaaggcactgtcatccgggtgttctcggttcccgatgggcaa
aagctctatgagtttcggagaggcatgaaaaggtacgtgacgatcagctctctggctttc
agtatggactcgcaactcctctgtgcttcgagcaacacggagaccgtgcacatcttcaag
ctggagcacctcgccaacagccagccagaggagccctcgacctggaccggctacatggga
aagatgctcatggctgcgaccaactacctccccacccaggtgtccgacatgatgaaccag
gacagggcctttgccactgggcgcctgggcttctctgggcacaggaacatctgcaccctc
tctacgatccagaagctgcccaggctcctggtggcatcgtccagtggacacctttacatc
tacagcttggaccctcaggacggaggagactgcgtcctaatcaagacccacagcttgctt
ggctcaggaactgccgatgagaataaagaaaacgacctcagagcttccttacctcagtct
tacgcagcaactgtggccagaccaagcccttctgcagcctccacggtgccaggttattct
gaggatggcggggcgctccgaggagaggtcatccccgaacacgagtttgcgacgggacca
gtgtgtcttgatgatgagaatgagttcccccctaaggaaggcttcctgccagtgagagtg
ccgatcactgaacgagcttccccagaacggtcgctaggccctagcaatttcggagcagcc
cccgtgtgcggagccagtggtaggggtctcggagaccatcagaccccagccctgccctca
tgcctgcaggcagagcgatggggtagcaggtgggcttctgcatctcagtgcacaaggatc
ggggcctga

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