Orcinus orca (killer whale): 101279228 Help Entry 101279228         CDS       T05247                                  Symbol SDC1 Name (RefSeq) syndecan-1   KO K06257   syndecan 1 Organism oor  Orcinus orca (killer whale) Pathway oor04512   ECM-receptor interaction oor04514   Cell adhesion molecules oor04820   Cytoskeleton in muscle cells oor05144   Malaria oor05205   Proteoglycans in cancer oor05418   Fluid shear stress and atherosclerosis Brite KEGG Orthology (KO) [BR:oor00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101279228 (SDC1)    04514 Cell adhesion molecules     101279228 (SDC1)  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     101279228 (SDC1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     101279228 (SDC1)   09174 Infectious disease: parasitic    05144 Malaria     101279228 (SDC1)   09166 Cardiovascular disease    05418 Fluid shear stress and atherosclerosis     101279228 (SDC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oor04131]     101279228 (SDC1)   09183 Protein families: signaling and cellular processes    04090 CD molecules [BR:oor04090]     101279228 (SDC1)    00535 Proteoglycans [BR:oor00535]     101279228 (SDC1) Membrane trafficking [BR:oor04131]  Exocytosis   Calcium ion-dependent exocytosis    Acrosomal exocytosis proteins     101279228 (SDC1) CD molecules [BR:oor04090]  Proteins   101279228 (SDC1) Proteoglycans [BR:oor00535]  Cell surface proteoglycans   Syndecan family (transmembrane HSPG)    101279228 (SDC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Syndecan Romo1 Motif Other DBs NCBI-GeneID:  101279228 NCBI-ProteinID:  XP_012390320 LinkDB All DBs Position 13:76626627..76650666 Genome browser AA seq 311 aa AA seqDB search MRRPALWLWLCALALRLQPALPQTVAVNVPPEDQDGSGDDSDSFSGSGAGALPDITVSQQ TPSTWKDKGLLTATPTAPEPSRPDTTVTSTSILPTGEQPEGGGLVLLGELEPGLTAQEKE ATHPPSGTTLHPTTHRASTARATTAQGPAATSHPHRDVQPDHHETSAPTGHSQLEPQAPS VEDGASATTEKAAEGEAPTQLPEGEGSGEQDFTFDVSAENSAGATVEPGQRNVPPGDPGA TGASQGFLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAY QKPSKQEEFYA NT seq 936 nt NT seq  +upstreamnt  +downstreamnt atgaggcgcccggcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggcc ctcccgcaaactgtggctgtaaacgtgccccccgaggatcaggatggctctggagatgac tccgacagcttctctggctcgggcgcaggcgctctgccagatatcaccgtgtcacagcag accccctccacctggaaggacaaggggctcctgacggccacgcccacggctccagagccc agccgcccggataccacggtcacctccacctccatcctgccgactggagagcagcctgag gggggcgggctggtgctcctaggagagctggaacctggcctcactgcccaagagaaggag gccacccacccacccagtgggaccacgctgcacccaaccacccaccgggcatcgacagcc agagctaccacggcccaggggcctgctgccacctcccatccccacagggacgtgcagcct gaccaccacgagacctcagctcccacaggtcacagtcagctcgagcctcaggctcccagc gtggaggatggagcttctgctaccaccgagaaggctgctgagggtgaagcccccacccag ctcccagaaggagagggctctggcgagcaggacttcacctttgacgtgtcggcggagaac tcagccggggccactgtggaacctggccagcggaacgtgcccccaggggatcccggggcc acgggggcctcgcagggcttcctggacaggaaggaagtgctgggaggggtcattgccgga ggcctcgtgggactcatctttgctgtgtgcctggtgggtttcatgctgtaccggatgaag aagaaggacgagggtagctactccttggaggagccgaagcaagccaatggcggggcctac cagaagcccagcaaacaggaggagttctacgcctga

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