Orcinus orca (killer whale): 101279243
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Entry
101279243 CDS
T05247
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X2
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101279243 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101279243 (DCP1B)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101279243 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
101279243 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
101279243
NCBI-ProteinID:
XP_004279172
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All DBs
Position
11:1943485..1994492
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AA seq
553 aa
AA seq
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MAAAAGYPAGKGRDMSLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTDVEGTLFV
YTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQ
RIAELMKNLTQYEQLKAHHGAGAAVGASPVGLGSGERKEVDILRMLTKARDEYAKCKACP
EPKQISSSSAIYDNPNLIKPIPVKPSGSRQQRGPRPGQTLDPEPQHLSLTALFRKLDKAT
CHEAARPPKTLHQQQQEKLPLRQGVVRSLSYEEPRRCSPPVEKQLCPAIQKLLVGIADLQ
PLAELPESRPCRDAARPGSPRGPEVSRRVHGAPRTQNPPDQLQSIPGAPAPDASAETPGP
RALPRPAPPGPGPGRQPLGPSEVSPRELLWKLQAVQQERQLPAPGRPALAAKFPVATPSA
GARNPLESWRDQTPSAEQQAPLLQVLSPRRAPPAAGPSPLMSPLVFAQPSWAPPPERGSG
LLPPGSQDPEATPSGPLLPLQTPEPPRTPGSALTKPQLQEALLHLIQNDDNFLNIIYEAY
LFSMTQAAVKKTL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgggctacccagccgggaagggccgcgacatgagcctggcggccctg
cggcgccacgatccctacatcagccgcatcgtggacgtggccagccaggtggccctgtac
accttcggccaccgggccaacgagtgggaaaagactgatgtggaaggaaccttatttgtt
tacacaaggtctgcttctccgaaacacggcttcaccatcatgaacaggctaagcatggag
aataggacagagcccatcacgaaagacctggatttccagctccaggaccccttccttctc
tacagaaatgccagattgtccatttatggaatttggttttacgacaaggaagaatgccaa
agaattgcagagcttatgaaaaacctcactcagtacgaacagctgaaagcgcaccacgga
gcgggggcggcagtgggagcgtcccccgtgggcctcggctcgggagagcgcaaggaggtg
gacatcctacggatgctcaccaaggccagagacgaatacgcgaagtgtaaagcctgtcct
gagcccaaacagatcagcagctcgtccgccatctacgacaaccccaatctcatcaagcca
attccagtgaagcccagcgggagccggcagcagcgcggccctcggcccggccagacctta
gaccctgaaccccaacacctgtccttgacggccctcttcaggaagctggacaaagctacg
tgtcacgaagccgcgcggcctccaaagaccctccaccagcagcagcaagagaagcttccg
cttcggcagggggtcgtccgctccctgtcctacgaggaaccccgaagatgctcgcccccg
gtcgagaagcagctctgtcccgccattcagaagctcctggtcgggatcgcggacctgcag
ccgctggcagagctgcccgagagccggccctgtagagacgccgcccggccggggtctccc
cgcggccccgaggtctcccgccgcgtgcacggtgcccccaggactcagaacccgccggac
cagctccagagcatccctggggcgccggcaccagacgcctcggccgagacgccggggccc
cgggcactcccgaggccagcgccccccggccctgggcccggccgtcagcccctggggccc
agcgaggtctccccgcgggagctgctgtggaagctccaggcggtgcaacaggagcggcag
ttgccggcgcccggccgcccagcgctggcggccaagttccccgtggccaccccgagcgct
ggagcacggaaccccctggagtcctggagggaccagacccccagcgcggagcagcaggct
cccctccttcaggtcctctcgccccggcgcgccccgcccgccgcaggcccatctccgctc
atgtcgccactggtgttcgcgcagccctcctgggccccaccgccagagaggggcagcggg
ctcttgcccccgggaagccaggacccggaggccacccccagcggccccctcctgcccctg
cagacgccggagccccccaggacgccaggcagtgccctgaccaagccgcagctccaggag
gccctgctgcacctcatccagaatgacgacaacttcttaaatataatctacgaagcttat
ctcttcagcatgacacaagcggccgtgaaaaagactctgtga
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