KEGG   Orcinus orca (killer whale): 101279258
Entry
101279258         CDS       T05247                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04014  Ras signaling pathway
oor04137  Mitophagy - animal
oor04144  Endocytosis
oor04145  Phagosome
oor04148  Efferocytosis
oor04962  Vasopressin-regulated water reabsorption
oor05132  Salmonella infection
oor05146  Amoebiasis
oor05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    101279258 (RAB5C)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101279258 (RAB5C)
   04145 Phagosome
    101279258 (RAB5C)
   04137 Mitophagy - animal
    101279258 (RAB5C)
   04148 Efferocytosis
    101279258 (RAB5C)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    101279258 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101279258 (RAB5C)
   05152 Tuberculosis
    101279258 (RAB5C)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    101279258 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oor04131]
    101279258 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oor04147]
    101279258 (RAB5C)
   04031 GTP-binding proteins [BR:oor04031]
    101279258 (RAB5C)
Membrane trafficking [BR:oor04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    101279258 (RAB5C)
 Endosome - Lysosome transport
    101279258 (RAB5C)
Exosome [BR:oor04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101279258 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   101279258 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   101279258 (RAB5C)
  Exosomal proteins of bladder cancer cells
   101279258 (RAB5C)
GTP-binding proteins [BR:oor04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    101279258 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 101279258
NCBI-ProteinID: XP_004282855
LinkDB
Position
19:40971673..40994195
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
RQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNTACAPGRNRGVDLQENNPASRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcgggtcggggaggtgcagcacgacccaacggaccagctgctgggaacaagatctgt
cagtttaagctggtcctgctgggggagtccgcagtgggcaaatccagcctcgtcctccgc
tttgtcaagggtcaattccacgagtaccaggagagcacaattggagcggccttcctcaca
cagaccgtctgcttggacgacacaacagtcaagtttgagatctgggacacagctggacag
gagcggtatcacagcctggcccccatgtactatcggggggcccaggctgccatcgtggtc
tacgacatcaccaacacagatacgtttgcacgggccaagaactgggtgaaggagttgcag
aggcaggccagccccaacatcgtcatcgcgctcgcgggcaacaaggccgacctggccagc
aagagagccgtggagttccaggaagcacaagcctatgcagaggacaacagtttgctgttt
atggagacatcagcaaagactgcgatgaacgtgaatgaaattttcatggcaatagctaag
aagcttcccaagaacgagccccagaatacagcttgtgctccgggccggaaccgaggagtg
gacctccaggagaacaaccctgccagccggagccagtgctgcagcaactga

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