Orcinus orca (killer whale): 101279397
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Entry
101279397 CDS
T05247
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101279397 (SOX21)
Transcription factors [BR:
oor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101279397 (SOX21)
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Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
101279397
NCBI-ProteinID:
XP_033291032
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Position
18:14998318..15001562
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AA seq
275 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVTDAEHPALKAGAGLHAG
AGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAGSPYSLLDLGSKMAE
ISSSSSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNCS
AWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggaccacgtcaagcggcccatgaatgccttcatggtctggtcgcgg
gctcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctcaccgaatcggagaagcggccgttcatcgacgag
gcgaagcgcctgcgcgccatgcacatgaaggagcacccagactacaagtatcggccgagg
cgcaagcccaagacgctgctcaagaaggacaagttcgccttccctgtgccctacggcctg
ggcggcgtgaccgacgccgagcacccggcactcaaggcgggcgccgggctgcacgcgggc
gcgggtggcggcctggtgcccgagtcgctcctcgccaaccccgagaaggcggccgccgcc
gccgccgcggctgccgcccgcgtcttcttcccgcagtcggccgccgccgccgccgcagcc
gccgccgccgccgccggcagcccctactcgctgctcgacctgggctccaagatggcagag
atctcgtcctcctcgtccggcctcccgtacgcgtcgtcgctgggctacccgaccgcgggc
gcgggcgccttccacggcgcggcggcggcggctgcagcagcggccgcggccgccgggggg
cacacgcactcgcaccccagcccgggcaacccgggctatatgatcccgtgcaactgcagc
gcgtggcccagccccgggttgcagccgccgctcgcctacatcctactgcccggcatgggc
aagcctcaactggacccctaccccgcggcctacgccgccgcgctatga
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