Orcinus orca (killer whale): 101279471 Help Entry 101279471         CDS       T05247                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism oor  Orcinus orca (killer whale) Pathway oor03040   Spliceosome Brite KEGG Orthology (KO) [BR:oor00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101279471 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:oor03021]     101279471 (SF3B3)    03041 Spliceosome [BR:oor03041]     101279471 (SF3B3)    03036 Chromosome and associated proteins [BR:oor03036]     101279471 (SF3B3) Transcription machinery [BR:oor03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      101279471 (SF3B3) Spliceosome [BR:oor03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     101279471 (SF3B3)  Complex B     101279471 (SF3B3)  Complex C    U2 SnRNP specific factors     101279471 (SF3B3) Chromosome and associated proteins [BR:oor03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      101279471 (SF3B3)     TFTC complex      101279471 (SF3B3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  101279471 NCBI-ProteinID:  XP_004273296 LinkDB All DBs Position 20:13366406..13440314 Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttcctgtacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc aacttctctggaaccaaacaacaggaaattgttgtttcccggggaaagatcttggagctg cttcgccctgaccccaacaccggcaaagtacacactctactaactgtggaagtatttggt gtcatccggtcactcatggcctttaggttgacaggtggcacaaaagactacattgtggtt ggtagtgactcaggtcggattgttattctggaataccagccatctaagaatatgtttgag aaaattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc ttagctgtggatcccaaagggcgagctgttatgattagcgccattgagaaacagaaattg gtgtatatcttgaacagagatgctgcagcccggcttaccatttcatctccactggaggcc cacaaagcgaacactttagtgtatcatgtggtcggagtagatgtgggatttgaaaatcca atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaactggggaagca gcggctaatacccagcagacacttactttctatgagttagaccttggtttaaatcatgtg gtccgaaaatacagtgaacctttggaggaacatggaaacttccttattacagttccgggg gggtcagatggtccaagtggagtgctgatttgctctgaaaactacatcacctataagaac tttggtgaccaaccagatatccgctgtccaattcccaggagacggaatgacctggatgac cctgaaagaggaatgatttttgtctgctctgccacccataagacgaagtcaatgttcttc tttttggcccaaactgagcagggagatatctttaagatcactttggagacagatgaagat atggttaccgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt gtgcttaaaacaggcttccttttcgtagcatcagaatttggaaaccattacttgtatcaa attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa gaaggagatacattcttttttcagccaagaccactcaaaaaccttgtgctggttgatgag ttggacagcctctctcccattttgttttgccagatagctgacctggccaatgaagacact ccacagctatatgtggcctgtggtaggggaccgaggtcatctctgagggtcttaaggcat ggacttgaggtatcagaaatggctgtctcagagctacccggtaaccccaatgctgtctgg acagtgcgtcggcacattgaagatgagtttgatgcttacatcattgtgtctttcgtgaat gccacacttgtgttgtccattggagagactgtagaagaagtgactgactctgggtttctg ggcactaccccaaccttgtcctgctccttgttaggagatgatgccttagtgcaggtgtat cctgatggcattcggcacatacgagcagacaagagagtcaatgagtggaagactcctgga aagaaaacaattgtgaaatgtgcagtgaaccaacgacaagtggtgatcgccctgacagga ggagaactggtctattttgaaatggatccctcaggacagctgaatgaatacacagaacgg aaggagatgtcagcagatgtggtgtgcatgagtctggccaacgtcccccctggagagcag cggtctcgcttcctggctgtggggctggtggacaatactgtcagaatcatctccctggat ccctcagactgtttgcaacctttgagcatgcaggctctcccagcccagcctgagtccttg tgtattgtggaaatgggtgggactgagaagcaggatgagctgggtgagaggggctctatt ggcttcttatacctgaatattgggctacagaatggtgtgttgctgagaacagtcctggac cctgtcactggggatctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa ctctttcgtgtccggatgcaaggccaggaggcagtgttggccatgtcaagccgctcatgg ttgagctattcttaccaatctcgtttccatctcacccccctgtcttacgagaccctggaa tttgcatctggcttcgcctctgaacagtgccctgagggcattgtggccatctccaccaat accctgaggattttggcattggagaagctgggtgctgtcttcaatcaagtagcctttcca ctgcagtacacacccaggaaatttgtcatccaccctgaaagtaacaaccttatcatcatt gagactgatcataatgcctacactgaggccacaaaagctcagaggaagcagcagatggca gaggaaatggtagaagcagcaggggaggatgagcgagagctggctgcggagatggcagca gcattcctcaatgaaaacctccctgagtccatttttggagctcctaaggctggcaatgga cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacacactggaccttgtc cagctggaacagaatgaagctgcttttagtgtggctgtgtgcaggttctccaacactggc gatgattggtatgtgctggtgggtgtggccaaagacctgatactgaatccccgatctgta gccgggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagtttttg cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg attggtgtggggaagcttctgcgagtctatgacctgggaaagaagaagttactccgaaag tgtgagaacaagcatatcgccaattacatctctgggatccagacaattggacatagggta attgtatctgatgtccaggaaagtttcatctgggttcgctacaagcgtaatgagaaccag cttatcatctttgctgatgatacctacccccgatgggtcacaacagctagcctcctggac tacgatactgtggctggggcagacaagtttggcaacatttgtgtcgtgaggctcccacct aacaccaatgatgaagtggatgaggatcccactggaaacaaagccctgtgggaccggggt ttgctcaacggggcctctcagaaggcagaagtgatcatgaactatcacgtgggcgagaca gtactttcgttacagaagaccacgctgatccctggaggctcagaatcgcttgtctatacc accttgtcaggaggaattggcatccttgtcccgttcacatcccatgaggaccatgacttc ttccagcatgtggaaatgcacctccggtccgagcatccccctctctgtgggcgagaccac ctcagttttcgttcctattacttccctgttaagaatgtgattgatggagatctctgtgag caattcaactccatggagcccaacaaacaaaagaatgtctctgaggaactggaccgaacc ccacctgaggtgtccaagaagcttgaggacatccggactcgctacgccttctga

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