KEGG   Orcinus orca (killer whale): 101279556
Entry
101279556         CDS       T05247                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101279556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oor03041]
    101279556
Spliceosome [BR:oor03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101279556
 Complex B
    101279556
 Complex C
   U2 SnRNP specific factors
    101279556
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 101279556
NCBI-ProteinID: XP_049551317
LinkDB
Position
12:71256209..71259928
AA seq 444 aa
MSVNKRIDRSLSGDGGSSFAMAAGPISKRNQDATVYVGGLDEKVSEPLLWXLFLQAGPVV
NTHMPKDRVTGQHQGYGFVEFLSEEDADCAIKIVNMIRLYGKPIRVNKASAHNKNLDVGA
NIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDAADAAID
TMNGQYLCNRPITVSYAFKKDSKGERHGSATEQLLAAQNPLSQADRPHQLFADAPPPPSA
PNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAGGHGPPSAGT
PGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPG
MRHHGPPPMGMPARGPPFGSPLGHPGPMSPHGMRGPPPLMPPHGYTGPPRPPPYGYQRGP
LPPPRPTPRPPVPPRGPLRGPLPQ
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtccgtcaacaagaggattgatcgatcgttgtctggagacggcgggagttcttttgcc
atggcggccgggccgatctccaagcggaaccaggatgccactgtgtatgtggggggcctc
gatgagaaggttagcgaaccactgctgtggnagctgtttctccaggcagggccagtagtc
aacacccacatgccaaaggatagagtcactggtcagcaccaaggctatggatttgtggaa
ttcttgagtgaggaagatgctgactgtgccattaagatcgtgaacatgatcagactctat
gggaaaccaatacgggtgaacaaagcatcagctcacaacaaaaacctggatgtgggggcc
aacattttcattgggaacctggacccagagatcgatgagaagttgctttatgatactttt
agcgcctttggggtcatcttacaaacccccaagattatgcgggaccctgacacaggcaac
tccaaaggttatgcctttattaattttgcttcatttgatgctgcggatgcagcgattgac
accatgaatgggcagtacctctgtaaccgcccaatcaccgtgtcctatgctttcaagaag
gactccaaaggtgaacgccatggctcagccactgaacaacttctggcagcacagaaccca
ctctcccaggctgaccgccctcatcagctgtttgcagatgcaccccctccaccctctgct
ccgaatcctgtggtatcatcactggggtctgggcttcctccaccaggcatgcctcctcct
ggctccttcccaccaccagtaccgcctcctggagcccttccacctgggatacccccagcc
atgcccccaccacctatgcctcctggagctggaggacatggccccccatcagcaggaacc
ccaggggctggacatcctggacatggacactcacatcctcacccattcccaccgggtggg
atgccccatccagggatgtctcagatgcagctggcccaccatggccctcatggcttagga
cacccccatgctgggccccctggctctggggggcagccaccaccccgaccaccacctgga
atgcgtcatcatggaccccctccaatgggcatgcccgcccgagggcctccgttcggctct
cccttgggtcacccaggtcctatgtctccgcatggtatgcgtggacctcctccactgatg
ccccctcatggatacactggccctccacgacctccaccctacggctaccagcgggggccc
ctccctccacccagacccactccccggcctccagttccccctcgaggcccacttcgaggc
cctctccctcagtga

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