Orcinus orca (killer whale): 101279619
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Entry
101279619 CDS
T05247
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101279619 (TDRD12)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
101279619 (TDRD12)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101279619 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
TRAF_BTBD17
Helicase_C
Gal-bind_lectin
Motif
Other DBs
NCBI-GeneID:
101279619
NCBI-ProteinID:
XP_033269697
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All DBs
Position
20:41249687..41340501
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AA seq
1309 aa
AA seq
DB search
MLHVLVLKIEDPGCFWVIIKGCSPFLDHEVDYQKLNSAMNDFYNSMCQDIEIKPLTLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLTECFLVDFAKYVPVKSKNIRVAVETFMQLPY
RAKKFRLYCTKPVTLHIDFCEDSAEIVPAKKWDSAAIRYFQNILKAATQVEAKLCAVEED
TFEVYLYVTTKHEKVCVNDDLVAKNFAYYVSPTENKNLDSLEKPRLNIKSASFSSKLNPA
LTLWPMFLQGEDSQRMEKSSGLTFLAKSLQHPCPKGVGDLGPTSRILDTAIKYNTDSLRD
SPKKKSEKKQQCVSLKDVNKCAESSVYWPMKRGTTMSADPDTPAASALCQKSNEKPLRLA
EKKGYNEKNVCVKLLQFLNPDHLRADGISDLQQLQKLKSGSRLPLVVLRTRVEPCLSINT
APLSADLKKALQRNKFPGPSHTESYSWPPIARGCDMVVISHCGNDPLLYLPPLLTILQTG
GCYKSLPSRNGPLAVIVCPGWKKAQLVFELLGDYSVSSRPVVHPVVLTVGLHKDEAKNMK
LPSGCNVIVTTPHSLLRLLKYQSLLFLRLCHLILDEVEILFSEANEQMFPILDNFKKIIE
VEERESAPHQIVAVGVHWNRHIEQLIKEFMNDPYIVITAMEEAALCGSVQQVVRLCLECE
KTSTLLQTLDFVPSQAQKTLIFTGSVAETEIVCKVVESSSVFCLKMHKEMIFNLKSVSEQ
WKKKLSSGSHIVLALTDDCTPLLAITDATCVIHFSFPSSPKIFGGRLYCMSDHFQSLTEQ
GSPAEQREKKTKSVLLLTERNACHAVGVLRYLERADTKIPSELYEFTAGVLEAKEDKKAR
RPLCPYLKAFGFCKDKRICPDRHHVNPEVDMPRKLSNQTLPVFGYIKIIPFYVLNATNYF
GRIVDKHVDLYATLAADMKEYFEDSSNKTTVEKVEKFGLYGLAEKVAFHRVQVLEMSQKE
DTWALDNVLVKFIDEGRTKLITRDQLLHLPESFHTLPPQAVEFIVCRVKPADNEIEWNPK
VTRYIHHKINGKLHDAKVMLALGNTVWIDPMVHTTKLENLKTSVIDYNVRAEILSMGMGI
DNSEHVEQLKKLYKGAKMPTFEESVSQTLMPSSTEDDACLQSTQQEDKGSERGADSQTNS
ENPTHETLPENTGDASINKTTGPLKSFHPQIKWFQKEDVVILKIRIRNVKDYKCKYFRDR
VVFSAWAGERFYSADLELQANIIKDDCKCTVENGEPIITLSKEKKESWCGLLRQRNPNVA
FDFDHWEECDEDEDSHFSRLVNSKNPSCKVVELVETSDKASDENESESE
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgctccacgtcctggtgctgaagatcgaagatccaggttgcttctgggttattataaaa
ggatgtagtccctttttagatcatgaagttgactatcaaaaactaaatagtgccatgaat
gacttctataacagcatgtgtcaagatatagaaataaaaccactaacgttggaagaaggg
caggtttgtgtggtttattgtcaggaactgaagtgctggtgcagggctgttattaagtca
atagtgtcttcagcagaccattacctcacagagtgtttccttgtggattttgccaagtac
gttccagtgaaatccaaaaacatccgagttgcagtagaaacttttatgcagcttccctac
agagcaaaaaaattcagactgtactgcacaaaacctgtcacattgcacattgacttctgt
gaagacagcgctgagattgtacctgccaagaagtgggacagtgcagctattcggtacttt
cagaacatcctaaaagcagctacccaggtggaagccaaattgtgtgctgtggaagaagat
acttttgaggtttacctttatgtaactacaaaacatgaaaaggtttgtgtgaacgatgat
ctggttgcaaagaacttcgcttattatgtatcacccacggagaataaaaaccttgattct
ttagagaaaccaagattgaatataaaatcagcatccttttccagtaaactcaatccagcg
cttactctttggccaatgtttttgcaaggagaagattctcaaaggatggaaaagtcaagt
ggtttaacttttctggcaaagtctctccagcatccgtgccccaagggtgtcggtgacctc
gggccaacctctaggatcctggatacagctataaagtataatacggattcattgcgagac
tcacccaaaaaaaaatcagaaaagaaacaacagtgcgtctccttaaaagatgtaaataag
tgtgctgagtcttcagtgtattggccaatgaaaagaggcacaaccatgtctgccgatcca
gatacaccagcagcaagtgctttatgtcagaagtcaaatgagaaaccacttagattggct
gagaagaaaggatacaatgagaagaacgtctgtgtgaaattattgcagtttctaaatcct
gatcatttgagagccgatggaatctctgatctgcagcagttgcagaagctgaagtcaggc
tcccggctgcccttggtcgttctgcggaccagggtcgagccctgcttgtccatcaacacg
gcgccactctcggcagacctgaaaaaggctcttcaaagaaataagtttccgggccccagc
cacactgaatcttactcttggcctcccatagcacgtggctgtgacatggtggtcatttct
cattgtggaaatgaccctttgttgtaccttccaccactgcttacgattttgcaaacaggg
ggctgctacaagtcattaccaagtagaaatggacctctggcagtcatcgtgtgccctggg
tggaaaaaggcccaattagtttttgaattattgggagactatagcgtgtcctccaggcct
gttgttcatcctgtggtattaacagtcggactccacaaagatgaagccaaaaatatgaag
cttccaagtgggtgcaatgtaattgttacaacaccacatagcctcctgagacttctcaaa
tatcaaagcttgttatttcttagactctgtcatctgattttggatgaggtggaaatatta
ttctctgaagctaatgaacaaatgtttcctatattagataactttaaaaaaattattgaa
gttgaagaaagggaatctgccccacatcagattgtcgcagttggagttcattggaacaga
catatagagcagttaatcaaagagttcatgaacgacccctacattgtgatcacagccatg
gaggaggctgccctctgtggcagtgtccaacaggtagtacgtctttgcctggaatgtgaa
aagacctccactttactccagactcttgatttcgttccaagtcaggcacaaaagaccttg
atcttcaccggttctgtagctgaaacagaaatagtgtgtaaggtagtagaaagcagctcc
gtattttgtttgaaaatgcataaagaaatgatttttaatttaaaaagtgtttcagaacag
tggaagaagaagttaagttctggttctcacattgtattagccttaacagatgattgcaca
ccactcttggccatcaccgatgccacgtgtgtgattcacttcagctttccttcctcgccg
aaaatttttggtggacgcctgtattgcatgtctgatcattttcagagtttaactgaacag
ggttctcctgcagaacagagagagaaaaaaaccaaatctgtgttgctgctgacggagaga
aatgcctgccatgcagttggcgtcctgcgctacttggagcgagcagataccaagattcct
tcagagctctacgagtttactgcaggggttctggaagccaaagaagataaaaaagccaga
aggcctctttgtccgtatcttaaggcttttggtttttgcaaagacaaaaggatctgtcct
gatcgacaccatgttaatccagaagtagacatgccaaggaagttatccaaccaaactcta
ccagtgtttggatacataaaaataatacccttttatgttttgaatgcaacaaattacttt
ggtcgcatagttgataaacatgtggatctttatgcaactcttgctgctgacatgaaagag
tattttgaagattccagtaataaaacaactgttgaaaaggtggagaaatttggattatat
ggattagcagaaaaagtagcttttcacagggttcaggtgttggagatgagccagaaggag
gacacgtgggccctggataatgtccttgtgaagttcatagatgaaggcaggaccaaactc
atcacaagagaccagctgcttcacctcccagaaagtttccacactctgccccctcaagcc
gtggagtttatcgtttgtagagtgaaacccgcggacaatgagattgaatggaatccaaag
gttactaggtacattcatcataaaattaatgggaaactgcatgatgcaaaagtgatgttg
gctttaggaaatacggtttggattgatccaatggtgcacacgacaaaacttgaaaacttg
aaaacttctgtcattgattataatgttcgagctgaaattttgtcaatgggaatgggcatt
gataactcagaacatgtagaacaactgaaaaaattatacaaaggagctaaaatgccaact
tttgaagaaagcgtaagccagaccctgatgccttcttcaacagaagacgatgcttgtctg
cagagcacacagcaagaggacaagggctcagagagaggtgccgactcccagacaaactca
gaaaacccaacacatgaaactttacctgaaaacactggagatgcttccattaacaaaact
acagggcctctgaaaagcttccacccacaaataaaatggttccaaaaagaggatgtggtc
atattgaagataagaataaggaatgtaaaagattacaaatgtaaatactttagagataga
gttgttttcagtgcctgggcgggagagagattttactcggctgacttggagctgcaggcc
aacataataaaagatgattgcaaatgcacagtggaaaatggtgaaccaataatcactctc
tcgaaagagaaaaaggagtcttggtgtggcttactcagacagaggaatcctaacgtggct
tttgattttgatcactgggaagaatgtgacgaggatgaggatagccacttctccaggctg
gtaaattctaaaaacccgtcctgcaaagtggtagagttggttgagaccagtgacaaagct
tcagatgaaaacgaaagtgagagtgaatga
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integrated database retrieval system
