Orcinus orca (killer whale): 101279787
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Entry
101279787 CDS
T05247
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
101279787 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oor04040
]
101279787 (SCN9A)
Ion channels [BR:
oor04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101279787 (SCN9A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
Toxin_22
Motif
Other DBs
NCBI-GeneID:
101279787
NCBI-ProteinID:
XP_004267302
LinkDB
All DBs
Position
7:complement(55037376..55187022)
Genome browser
AA seq
1987 aa
AA seq
DB search
MAMLPPPGPQSFVYFTKQSLALIEQRIAEGKTKEPKEEKKDDDEEGPKPSSDLEAGKQLP
FIYGDIPQGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYILSPFSPLRRISI
KILVHSAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCVRTLLENNETIESILNTLDEEDYGK
YFYYLEGSKDALLCGFSTDSGQCPEGYTCVKVGKNPDYGYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKEL
EFQQMLDRLKKEQEEAEAIAMAAAEYTSIERSRIMGLSESSSETSKMSSKSAKERRNRRK
KNNQKKLSIGEEKGDDEKLSKSESEESIRRKSFHLGVEGHRRAREKRFSTPNQSPLSIHG
SLFSARRSSRTSLFSFKGRGKDIGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSPPGLPVNRKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTN
NQIHKKRRSSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPYWIKFKRLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLTVGNL
VFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINE
DCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQTAVARIKKGINYVKQTLREFFLKGFSTKPKIS
KEIRRTEDLNYKKENYISNHTLAEMSKDHNFHKEKDKTSGFGNSMDKYLVEESDGQSFIH
NASLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGRLNGSSSSECSTVDNPVPGEGEEA
EAEPVNSDEPEACFTDGCVQRLPCCQVNTESGKGKIWWNIRKTCYRIVEHSWFESFIVLM
ILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWL
DFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKFYQCVNTTDGSPFPTSEVENRSECFALMNVSQNVQ
WKNLKVNFDNVGLGYLSLLQVATFKGWMVIMYAAVDSVNVDRQPIYEYSLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPG
NKFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSAYMTEVLYWINVVFVILFTGE
CVLKLISLRCYYFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRIL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNF
ETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPRKVHPGSSVEGDCGNPSVGIFYFV
SYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSK
LSDFAAALDPPLLVAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRS
QMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGD
RDDDLPNKEDMVFDNVNENSSPEKTDGTPSTISPPSYDSVTKPDKEKYEKDKTEKEDKGK
DGKEGKK
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccaggacctcagagctttgtctacttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaaacaaaggaacccaaagaagaaaagaaa
gacgatgacgaagaagggccaaagccaagcagtgacttggaagccggcaaacagctgccc
ttcatctatggggacatccctcagggcatggtttcggagcccctggaggacctggaccct
tactatgcagataaaaaaactttcatagttttgaacaaagggaaagcaatcttccgtttc
aatgccacacctgctttgtacatcctctctcctttcagtcctctcagaagaatatctatt
aagattttagtacactccgcattcagcatgcttatcatgtgcactattctgacgaattgc
atatttatgaccatgagtaaccctccagattggaccaagaatgtagagtacacttttact
ggaatatatacttttgaatcacttgtaaaaatccttgcaagaggcttctgcgtaggagaa
ttcactttccttcgtgacccttggaactggcttgattttattgtcattgtttttgcgtat
ttaacagaatttgtaaatctaggcaatgtttcagctcttcgaactttcagagtgttgaga
gctttgaaaactatttctgtaatcccaggcctgaagaccatcgtaggggccctgatccag
tctgtgaagaagctttctgacgtcatgatcctgactgtgttctgtctgagcgtgtttgca
ctgattgggctgcagctctttatgggcaacctgaagcaaaaatgtgtgcggactctgctt
gaaaataatgaaacaatagaaagcatattgaatactctcgatgaagaagactatggaaaa
tatttttattacttggagggatccaaagatgctctcctttgtggtttcagcaccgattca
ggtcagtgtccagaagggtacacctgtgtgaaggttggcaagaaccctgactatggctac
acgagcttcgatactttcagttgggccttcttagccttgtttcggctaatgacccaggat
tactgggaaaacctttaccaacagacactgcgtgctgctgggaaaacctacatgatcttc
tttgttgtggtgattttcctgggatccttttatctaataaacttgatcctggcagtggtt
gccatggcctatgaagaacagaaccaggcaaacatcgaagaagctaggcagaaagagtta
gaatttcaacagatgttagatcgacttaaaaaagagcaagaggaagctgaggcaatagca
atggcagcagctgaatatacaagcattgagagaagccggataatgggcctctccgagagt
tcttccgaaacatccaaaatgagctctaaaagtgctaaagaaagaagaaacagaagaaag
aaaaataatcaaaagaaactctccattggggaagaaaagggagatgatgagaaattgtcc
aaatcggaatccgaggagagcatcaggagaaaaagtttccaccttggtgttgaaggtcat
aggcgagcacgtgaaaagagattttctacccctaaccagtcaccactcagcattcatggc
tccttgttttctgcaaggcgaagtagcagaacaagtctttttagtttcaaaggtcgagga
aaagatattggatctgagactgaatttgctgatgacgagcatagcatctttggggacaac
gagagcagaaggggctcactgttcgtgccccacagacctcgggagcggcgcagcagtaat
atcagccaagccagtaggtcccccccagggctgccggtgaacaggaagatgcacagcgcc
gtggactgcaatggtgtggtctccttggtggatggaccctcagccctcatgctccccaat
ggacagcttctgccagaggtgataatagataaggcaacttctgatgacagtggtacaaac
aatcaaatacacaagaaaagacgttccagttcttacctcctttctgaggatatgttgaat
gatcccaatctcagacaaagggcaatgagtagggcaagcatattaacaaacactgtagaa
gaactcgaggagtccagacaaaaatgtccaccttggtggtacagatttgcacacacattc
ttgatctggaattgctctccatattggataaaattcaaaagacttatctattttattgta
atggatccttttgtagatcttgctattaccatttgcatagttttaaacactctgttcatg
gctatggaacatcacccaatgactgatgaattcaaaaacgtgctcactgtgggaaatttg
gtctttactggcatctttgcagctgaaatggttttaaaactaattgccatggatccatac
gagtacttccaagtaggatggaatatttttgacagtcttattgtgactttaagcttagtg
gagctttttctagcagatgtggaaggattgtcagttctacgatcattcagactgctccga
gttttcaagttggcaaaatcttggccaacactgaacatgctgatcaagatcattggtaac
tcagtgggggctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgcc
gtggttggcatgcagctctttggtaagagctacaaagaatgtgtctgtaagatcaatgaa
gactgcacactcccacgctggcacatgaatgacttcttccactccttcctgattgtgttc
cgagtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaa
gccatgtgccttattgtttacatgatggtcatggtcattggaaacctggtggtcctcaac
ctatttcttgctttattattgagctcatttagttcagacaatcttacagcaattgaagaa
gacactgatgcaaacaacctccagactgcagtggctagaattaagaagggaataaattat
gtgaaacaaaccttacgtgaattttttctaaaaggattttccacaaagccaaagatttcc
aaagagataagacgaacagaagatctaaattataagaaggaaaactacatctctaaccac
acacttgctgaaatgagcaaggatcacaattttcacaaagaaaaagataaaaccagtggt
tttggaaacagcatggacaaatacttggtggaagaaagtgatggtcagtcatttattcat
aatgccagcctcacagtgacagtgccaattgcacccggggaatctgatttggaaattatg
aatactgaggaacttagcagtgattcagatagtgaatacagcaaagggaggctgaacgga
tcgagttcctctgagtgcagcacagttgataaccctgtgccaggagaaggagaggaagca
gaggctgagcctgtaaattcagatgagccagaggcctgttttacagatggttgtgtgcag
aggctcccatgctgccaagttaacacagaatcagggaaaggaaaaatctggtggaacatc
aggaagacctgctataggatagttgagcacagttggtttgaaagcttcattgtcctcatg
atcttgcttagcagtggtgctctggcttttgaagatatatatattgaaaagaaaaagacc
attaagattatcctggagtatgctgacaagatattcacttacatctttattctggaaatg
cttctaaaatggatagcatatggttataaaacctatttcaccaatgcctggtgttggctg
gatttcttaattgtcgatgtttctttggttactttggtcgcaaacactcttggctactca
gaccttggccccattaaatcccttcggacacttagagccttaagacctctgagagcttta
tctagatttgaaggaatgagggtggtcgtgaatgcactcataggtgcaatcccttccatc
atgaatgtgctacttgtgtgtcttatattctggctaatatttagcatcatgggagtaaat
ttgtttgctggcaagttctatcagtgtgttaacaccacagatgggtcaccgtttcctaca
agtgaagttgaaaatcgttctgagtgttttgcactcatgaatgttagtcaaaatgtgcaa
tggaagaacctgaaagtgaactttgataatgttggacttggttacctgtctctgcttcaa
gttgcaacatttaaaggatggatggttattatgtatgcagcagttgattctgttaacgta
gacaggcagcccatatatgaatacagcctctacatgtatatttattttgtcatcttcatc
atctttgggtcattcttcaccttgaacttgttcattggggtcatcatagataacttcaac
caacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaatat
tataatgcaatgaaaaagctgggatccaagaaacctcaaaagccaatacctcgtccgggg
aacaaattccaaggatgtatatttgacctagtaacaaaccaagcttttgatatagccatc
atggttcttatctgcctcaacatggtaaccatgatggtagaaaaagagggacaaagtgca
tacatgactgaagttttatattggatcaatgtagtttttgttatccttttcactggagaa
tgtgtgctgaaactgatctccctcagatgctactacttcactgtaggatggaacattttt
gattttgtggttgtgattctctccattgtaggtatgtttctagcagatttgatagaaagg
tattttgtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgaatcctg
cgtctgatcaaaggggccaaggggatccgcacgctgctctttgctttgatgatgtccctt
cctgcgttgtttaacatcggcctcctgctctttctggtcatgttcatttacgccatcttt
ggaatgtccaactttgcctacgttaaaaaggaagctggaattaatgacatgttcaacttt
gagacctttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggat
ggattgctagcacctattctcaacagtgcaccacctgattgtgaccccaggaaagttcat
cctggaagctcagttgaaggagactgtgggaacccatctgtggggatattctattttgtc
agttacatcatcatatcattcctggtcgtggtgaacatgtacatcgctgtcattctggag
aacttcagtgttgccactgaagaaagtactgagccgctgagtgaggatgactttgagatg
ttctacgaggtttgggagaagtttgatcccgatgccacccaatttatagaatacagcaaa
ctctctgattttgcagctgccctggatcctcctcttctcgtagcaaaaccaaacaaagtc
cagctcattgccatggatctgcccatggtcagtggggaccggatccattgtctcgacatc
ttatttgcttttacaaagcgtgttttgggtgaaagtggagagatggactctcttcgttca
cagatggaagaaaggttcatgtctgcaaatccttctaaagtgtcctatgaacccatcaca
actacactaaaacgaaaacaggaagatgtgtctgctactgtcattcagcgtgcttacaga
cgttatcgcttacggcaaaatgtcaagaacatatcaagtatatacataaaagatggtgac
agagatgatgatttgcccaataaagaagatatggtttttgataacgttaatgagaactca
agtccagaaaaaacagatggaactccatctaccatctctccaccttcatatgatagtgta
acaaaaccagacaaagagaaatatgaaaaagacaaaacagaaaaggaggacaaaggaaaa
gatggcaaggaaggcaaaaaatag
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