Orcinus orca (killer whale): 101279844
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Entry
101279844 CDS
T05247
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 29
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oor04121
]
101279844
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101279844
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GFIT
Motif
Pfam:
LRR_Zer-1
F-box-like
LRR_14
F-box
Motif
Other DBs
NCBI-GeneID:
101279844
NCBI-ProteinID:
XP_049559593
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Position
20:19169489..19183906
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AA seq
407 aa
AA seq
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MKLRIQDELEASALVPSDLLCYQLEKVPKAPTSTNSPQCPFFFPQMLTYILSFLPLSDQK
EASLVSRAWCCAAQNALREQPDLTFLDLSGCSELADGALLAVSRGLRRLWHLSLRKLQRL
TDARYSALRGLRELQSLDMAECCLVRGRESAQALGLVCGAPHPLVSLSLAYCSSLKDASV
LSLMPALGPSLRVLDLSSCVAPHQPDRAGHLHLPHPPVSPAPGLVQGAPLGIGPPAAKGP
FSLAIGPALLTLQALRDLDLTACSKLTDASLTKVLQVPQLRRLSLSLLPALTDKGLLAAA
RGCPSVERLVLSHCSRLSDEGWVQAAGSRPRLQHLNLSRCSQRSEQXWPPCGTLGSTGQA
CKQLRMADVAMCPGISMASVRRFQAQLPEVTCVQSRFVGEADLTLTL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaggatccaagatgaactagaagccagtgctctagtcccctctgacctactg
tgctatcagctggagaaggttccaaaggcccccaccagcactaacagcccccaatgccca
ttctttttccctcagatgctcacatatattctgagcttcctgcctctgtcagatcagaaa
gaggcctccctcgtgagtcgggcttggtgctgtgcagcccagaatgcccttcgggagcaa
ccagaccttaccttcctggacctcagcggctgctcagaactggctgacggggcactcttg
gctgtgagccggggcctgcggcgcctgtggcacctgagcctgaggaagctgcagcggctg
acggatgcgagatactcagccctaaggggcctgcgggagctgcagagcctcgacatggcc
gagtgctgcctggtgagagggcgggaatcggcccaggccctgggcttggtgtgcggagct
ccacacccactggtctccctcagcctggcctactgctcctcactcaaggacgcctcagtg
ctctccctgatgccagcgctgggcccaagcctcagggtgctagacttatcctcctgcgtg
gcccctcaccaaccggaccgtgcaggccatctgcacctacctcacccacctgtcagtccc
gcacctggcctggtgcaaggagctccgctgggcatcgggcctccagccgcaaaaggaccc
ttctccctggccatagggcccgccctactcacgctgcaggccctacgggacttggacctc
acagcctgcagcaagctgactgatgccagtttgaccaaggtgctccaggtcccccagctg
aggcggctgtcactgagcctgttgccagcactcacagacaagggcttgctggctgcggcc
agaggctgccccagcgtggagcgcttggtgctgagtcactgcagccgcctcagcgacgag
ggctgggtccaggcagccggctcccggccaaggctgcagcacctcaacctgtccaggtgc
agtcagcgctcggagcagtgatggcctccctgcggaacgctgggttccactgggcaggcg
tgcaagcagctccggatggcagatgtggccatgtgtcctggcattagcatggcttccgtc
aggcgcttccaagcccaactgcctgaggtgacctgcgtccagtcccgcttcgtgggagag
gctgacctgaccctaacactctga
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