Orcinus orca (killer whale): 101279861
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Entry
101279861 CDS
T05247
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X4
KO
K14416
elongation factor 1 alpha-like protein
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03015
mRNA surveillance pathway
oor05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101279861 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
101279861 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101279861 (HBS1L)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101279861 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
101279861
NCBI-ProteinID:
XP_004263844
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All DBs
Position
12:27928083..28010068
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AA seq
686 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDRPSVVEPIEEYDYE
DLKESSNSLLNHQLSGIDQARLFSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKMQNLKVKSEGAISTGKIAKGKSIDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTAEENGHIFHTPQKGHSSEDTGLVSSDVLETASKSALPSHTIQASEEQSSTPTPVKKS
SKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQE
SKKAGKSSFAYAWVLDETGEERERGVTMDVGMTKFETKTKVIILMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFK
PPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDVIKINVGCIFCGPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVSEPAVVKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcacgacgtgacagaccttcagttgttgaacctatagaagaatatgattatgaa
gatttgaaagaatcctccaattctcttttgaaccatcagctaagcggaattgatcaagct
cgtcttttttcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atactgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaaatgcagaatttgaaggtcaagagtgagggagcaatatctacagga
aagatagcaaaaggaaaatcaatagattcccagtcatctcgaagtgaatctgaaattgtg
ccaaaagttgctaaaatgactgtatctggaaagaagcaaactatgggatttgaagtgcct
ggagtaactgctgaagaaaatggtcatattttccacacacctcaaaaaggacattctagt
gaagataccggccttgtttcttctgatgtacttgagaccgcttctaaatcagcccttcca
tcccacaccattcaagcatcagaagagcagagttcaacaccgacaccagtgaaaaagtct
agcaagctgaggcaacaaatagatatcaaagcggagctggaaaagcggcaaggagggaag
caactcctcaacctagtggtcattggtcatgttgatgctgggaaaagtactctgatgggc
catttgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaatcttcgtttgcatatgcatgggtcttggatgagactggcgaa
gaaagggaaaggggagtaacaatggatgttggtatgacaaagtttgagaccaaaaccaaa
gttattatattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagcagttttagttgtagatgccagcaggggagaatttgaagct
ggatttgagactgggggacaaacacgagaacatggcctcttggttcgttctctgggagtg
acccagcttgcagttgcagtcaataaaatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgat
gtagcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcagtca
agtgaacttacaaaatggtataaaggactatgtttattagaacaaattgattccttcaag
cctcctcaaagatctgttgacaagcctttcagattatgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggtaaaattgaagctggttatatccaaactggtgac
cgactactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcatgat
gaacctgtcgactgggcggcagcaggcgatcatgttagtcttacgttggttgggatggat
gtcatcaaaatcaatgttggctgcatattttgtggccccaaagaacccattaaggtttgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggattt
cctgtgctgttacactaccaaactgtcagtgaacctgccgtggttaaacgattgattagc
gtcttaaacaaaagcactggtgaagtcacaaagaaaaagcctaaattgttgaccaaaggc
cagaatgcattggtggagctacagacacaaagaccagtggctcttgagctgtacaaagac
tttaaagagctggggagattcatgctgcgctacagtggttctaccatagctgctggtgta
gtcaccgagataaaaggctga
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