Orcinus orca (killer whale): 101280125
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Entry
101280125 CDS
T05247
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X2
KO
K13203
zinc finger RNA-binding protein
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101280125 (ZFR)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101280125 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
101280125
NCBI-ProteinID:
XP_004266076
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All DBs
Position
3:158592231..158667393
Genome browser
AA seq
1073 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAAAAAAQYSQQPASGVAYSHPTT
VASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGY
TQRQQEAPPPPPPATTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPS
VAETYYQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAA
ATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAAT
AAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEA
ALKASQNTSSSNNSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPI
PSTEPNVVSQATSSTAVSASKPTASPSSIAASNCTVNTSSIATSSVKGLTTTGNSSLNST
ANAKVSAVPANMAAKKTSTPKINFVGGNKLQSTGNKTEDLKGTECAKSTPVTAVQIPEVK
PDTVSEPVTPASLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHL
KGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRR
YEEDMYWRRMEEEQHHWDDRRRMPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDS
SDDRYVMTKHATIYPTEEELQAVQKIVSITERALKLVSDSLSEHEKSKSKEGDDKKEGGK
DRALKGVLRVGVLAKGLLLRGDRNVNLVLLCSEKPSKTLLSRIAENLPKQLAVISPEKYD
IKCAISEAAIILNSCVEPKMQVTITLTSPIIREENMREGDVTSGMVKDPPDVLDRQKCLD
ALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSP
QSPGDALRRVFECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLL
AFRQIHKVLGMDPLPQMSQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgccctgtagtttctttcacctatgtgcccagccggctgggggaagat
gccaaaatggcgaccggcaactactttggattcacccacagcggggcggcggcggcggcg
gctgcggcccagtatagccagcagccagcttcgggtgtagcctactctcatccaactacg
gttgctagctacactgtccatcaggctccagtagctgctcacacagttactgctgcctat
gcaccagcagccgccacagttgcagttgccaggcctgctccagtagctgttgcagctgct
gcaacagctgctgcatatggagggtaccccactgcacacacagcaactgactatggttat
acacagaggcaacaagaagcacctccaccaccgcccccagctactacacaaaactaccag
gactcgtactcatatgtaagatccacagctcctgctgtagcttatgatagtaagcagtac
taccaacaaccaacagcaactgcagctgctgtagctgctgccgcccagcctcagccttct
gttgctgagacctactatcagacagcccctaaagcaggttatagccaaggtgcaactcag
tatacacaagcccagcaaactcgacaagtgacagccataaaaccagccacaccaagtcca
gctaccactactttctccatttatcctgtatcctccaccgtacagccagtagcagctgca
gctactgtggtgccgtcctatacccagagtgctacttatagtaccacggcagttacttat
tctggtacatcttattcaggttacgaagcagccgtctattcagctgcatcctcctactac
caacaacagcagcagcaacagaagcaggcggcggcggcggcggcagcagctgctgcaaca
gctgcttggacagggaccaccttcactaaaaaagcaccattccaaaataaacaactgaaa
ccaaaacagcctcccaaaccaccccagattcactattgtgatgtttgtaagatcagctgt
gctggaccacagacttacaaagaacatttagaagggcagaaacataaaaaaaaagaagct
gcattgaaagcctcacagaataccagcagcagcaacaactccactcgtgggactcaaaat
cagctacgttgtgagctctgcgatgtgtcttgtacaggagcagatgcgtatgctgcccac
attcgtggtgctaagcatcagaaagtggttaaattacacacaaaacttggcaaacccatt
ccttcaacagaaccaaacgttgttagccaagctacttcttcaacagccgtgtctgcttca
aaaccaactgcctctccttcaagcattgcagcaagcaattgtactgtgaatacttcatca
attgcaacttcttcagtgaaaggtcttacaactacaggaaactcgtctcttaatagcaca
gccaacgctaaagtatcagcagtgcctgcaaatatggctgccaagaaaacatctacaccc
aaaataaactttgttggtggtaataagctgcaatcaacaggaaataaaacagaagactta
aaaggaaccgaatgtgctaaaagcactcctgtcactgctgtacagatcccggaagtaaag
ccagacacagtgtcagaaccagtcacacctgcgtcccttgctgctttgcagagtgatgtg
cagccggtgggccatgattatgtggaggaggtacgaaatgatgaaggaaaagtaattcga
ttccattgcaaattgtgcgagtgcagctttaatgatcccaatgctaaggagatgcactta
aaagggcgaagacacagacttcaatataaaaaaaaagtaaatccagatctgcaagtagaa
gtaaaacccagtattcgagcaagaaagattcaagaagagaaaatgaggaagcaaatgcag
aaagaggagtattggcgaagaagagaagaagaggaacgctggagaatggaaatgagacgt
tatgaagaggacatgtactggagaagaatggaggaagaacagcatcattgggatgatcgc
cgccgaatgcctgacggaggctatcctcatggtcccccaggcccactaggcctcctggga
gtccgaccaggcatgcctcctcagccacaggggcctgcacccttacgtcgtcctgactca
tctgatgatcgatatgtaatgacaaaacatgcaaccatttatccaactgaagaggaatta
caggcagttcagaaaattgtttctatcactgaacgtgctttaaaacttgtttcagacagc
ttgtctgagcatgagaagagcaagagcaaagagggagatgataagaaagagggaggtaaa
gacagagctttaaaaggagttttgcgagtgggagtattggcaaaaggattacttctccga
ggagatagaaatgtcaaccttgttttgctgtgctcagagaaaccttcaaagacattatta
agccgtattgcagaaaacctccccaagcagcttgctgttataagtcctgagaagtatgac
ataaaatgtgcaatttctgaagcggcaataattttgaactcatgtgtggaacccaaaatg
caagtcactatcaccctgacgtctccaattattcgagaagagaacatgagggaaggagat
gtaacctcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgac
gctctggctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcc
tgtgtgattatcatacgtattcttcgggacctctgtcagcgagttccaacttggtctgat
tttccaagctgggctatggagttactagtagagaaagcaatcagtagtgcttctagtcct
cagagtcctggagatgcactgagaagagtgtttgagtgcatttcttcagggattattctt
aaaggtagtcctggacttctggatccttgtgagaaggatccctttgataccttggcgaca
atgactgaccagcagcgtgaagacatcacatccagtgcacagtttgcattgagactcctt
gcattccgccagatacacaaagttctgggcatggatccactaccccaaatgagccaacgt
tttaacatccacaacaacaggaagcgaagaagggatagtgatggagttgatggatttgaa
gctgaggggaaaaaagacaaaaaggattatgataacttttaa
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integrated database retrieval system
