KEGG   Orcinus orca (killer whale): 101280149
Entry
101280149         CDS       T05247                                 
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X2
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101280149 (UTP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oor03009]
    101280149 (UTP4)
Ribosome biogenesis [BR:oor03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    101280149 (UTP4)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40 Beta-prop_WDR5 WD40_Prp19 ANAPC4_WD40 WDR55 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_HPS5 Beta-prop_Aladin WD40_Gbeta Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_Vps41 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_SPT8 PROPPIN Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st PQQ_2 Tor_FN3_1st
Other DBs
NCBI-GeneID: 101280149
NCBI-ProteinID: XP_012389749
LinkDB
Position
20:complement(17569611..17602227)
AA seq 622 aa
MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKVGCEDGS
VKLFQITPDKIQFERNFDRQKSRILSLSWHPAGTHIAAGSIDYISVFDVKSGSAIHKMLV
DRQYMGVSKRKCIIWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKNHLIANTDVQSIAI
SDQEDSFVVGTAEGTVFHFQLVSVTSNSSEKQWVRTKPFQHHTHDVRAVAHSPIALISGG
TDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLVSCAKKKQLLLFQFAHHLELWRLGSTV
ATGKNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWIAYSTASRFFLYRLNYEHDN
INLQRVSKMPAFLRSALQILFSEDSAKLFVASNQGSVHVIRLLEGSFKHLHTFQPQSGTV
ESMCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCTVPAYNFPVTALAIAPNTNNLVIA
HSDQQVFEYSIPDKQYTQWSRTIQKQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMF
CIIDKSLPLPNDKTLLYNPLPPTNESDIIRRRTAHAFKISKKYKPLLFMDLLDERTLVAV
ERPLDDIIAQLPPPIKKKKFGT
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgggtgaatttaaggtccatcgagtacgtttctttaattatgttccatcagggatccgc
tgtgtggcttacaataaccagtcaaacagattggctgtttcacgaacagatggcactgtg
gaaatttataatttgtcagcaaactactttcaggagaaagttggctgcgaagatggatct
gtgaaactatttcagatcaccccagacaaaatccagtttgaaagaaattttgatcgtcag
aaaagtcgaatcctgagcctcagctggcatcccgctggtacacacattgcagctggctcc
atagactacattagtgtgtttgatgtcaaatcagggagcgctattcataagatgcttgtg
gataggcagtatatgggtgtgtctaagcggaagtgtatcatatggggcgtggccttcctg
tccgatggcaccgtcataagcgtggactctgctgggaaggtgcagttctgggactcagct
accggtacccttgtaaagaatcatctcatcgcaaatactgacgtgcagtccattgccata
tctgatcaagaagacagtttcgtggtgggcacagccgaggggacagtgttccattttcag
ctggtctctgtgacttccaacagcagtgagaagcagtgggtgcggacaaagccatttcag
catcacactcacgacgtgcgagccgtggcccacagccccatagcactgatatctggaggc
acagacacccacttagtcattcgtcctctcatggagaaggtggaggtaaagaattatgat
gctgctctccgaaaaatcacttttccccatcgacgtctcgtttcctgtgcaaaaaagaag
cagcttctcctcttccagtttgctcatcacttggaactttggcgactgggatccacagtt
gcaacaggaaagaatggggatacacttccactctctaaaaatgcagatcacttacttcac
ctcaagacaaagggtcctgagaacattatctgcagctgtatctccccatgtggaagttgg
atagcctattctacagcttctcggttttttctctatcgtttgaattatgaacatgacaac
ataaacctccaaagggtttccaaaatgccagcgttccttcgctctgcccttcagattttg
ttttctgaggattcagcgaagctctttgtggcatcaaatcaagggtctgtgcatgtcatt
cggctgctggagggaagcttcaagcacctgcatacttttcagcctcagtcagggacagtg
gagtccatgtgtcttttggcagtcagtccagatggaaattggctagctgcatcaggtacc
agtgctggagtccatgtgtacaacgtgaaacaactaaagcttcactgcacagtgcctgct
tacaatttccctgtgactgctctggccatcgcccccaataccaacaaccttgtcattgct
cattctgaccagcaggtatttgagtacagcattccagacaaacagtatacacaatggagc
cggaccatccagaagcaggggtttcatcatctttggctccaaagggatactcccatcaca
catatcagttttcatcccaagagaccaatgcacatccttcttcatgatgcgtacatgttc
tgcatcatcgacaagtcattgcctcttccaaatgacaaaaccttactctacaatccactg
cctcccacaaatgaatcagatatcatcaggaggcgcacagctcatgcctttaaaatttct
aagaaatataagcctctactcttcatggatcttttggatgaaagaacactagtggcggta
gaacggcctctggatgacatcatcgctcagctgccaccacccatcaaaaagaagaaattt
gggacctaa

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