Orcinus orca (killer whale): 101280320
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Entry
101280320 CDS
T05247
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101280320 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101280320 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oor04147
]
101280320 (VPS36)
Membrane trafficking [BR:
oor04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
101280320 (VPS36)
Exosome [BR:
oor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101280320 (VPS36)
Exosomal proteins of colorectal cancer cells
101280320 (VPS36)
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Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
BBL5
Motif
Other DBs
NCBI-GeneID:
101280320
NCBI-ProteinID:
XP_004274674
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Position
18:63113860..63147502
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AA seq
386 aa
AA seq
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MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPSNKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENMPVSQSLQANRGSQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMVKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEELKLP
LRLRVFDSGVMVIELQSHKEEETVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagatcaacgagaccttggtgatccag
cagcgaggagtgcgcatctacgacggcgaggagaagataaaatttgatgctgggaccctc
cttcttagtacgcaccgtctaatttggagagatcagaaaaatcatgaatgctgcatggcc
attcctctttcccaaatcgtgttcattgaagaacaggcagctggaattgggaaaagtgcc
aaaatagtggttcatcttcacccagctccttctaacaaagaacctggcccattccagagt
agtaagaactcctacatcaagctgtccttcaaagaacacggccagattgagttttacagg
cgtttatcagaggaaatgacacagagaagatgggagaatatgccagtttcccagtcgttg
caagcaaatagaggatcccagccaggaagaataagggctgtaggaattgtaggtattgaa
aggaaactggaagaaaaaagaaaagaaactgacaaaaacatttctgaggccttcgaagac
ctcagcaagctgatggtcaaggctaaggaaatggtggagttatcaaaatccattgctaat
aagattaaagacaagcaaggtgacatcacagaagatgagaccatcaggtttaaatcctat
ttgctgagcatgggaatagctaacccggttaccagggagacctacggctcgggcacacag
taccacatgcagctggccaaacagctggctggaatattgcaggcacctttggaggaacga
gggggaataatgtcactcacggaggtgtactgtttagtaaaccgagctcgaggaatggaa
ttgctctcaccagaagatttagtgaatgcatgcaagatgctggaagagctgaaattacct
ctcaggctacgtgtgtttgacagcggcgtcatggtaattgaactacagtcccacaaggag
gaggaaacagtggcctcagccttggagacggtttcagaaaagggatctctaacatcagaa
gagtttgctaagcttgtgggaatgtctgtcctcctggctaaagaaaggttgcttcttgcc
gagaagatgggccatctttgccgagatgactcagtggaaggcttgcggttttacccaaat
ttatttatgacacagagctaa
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